Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2107 |
Symbol | |
ID | 5454279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2289476 |
End bp | 2290483 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640877684 |
Product | glyceraldehyde-3-phosphate dehydrogenase, type I |
Protein accession | YP_001413378 |
Protein GI | 154252554 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.0608592 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTGC GCGTTGCGAT TAACGGATTC GGTCGGATCG GGCGCCTTGT GCTTCGCGCC ATTGCGGAAT CAGGCCGCAA GGACATCGAA GTCGTAGCGA TCAACGATCT TGGCTCTGTC GATGCGAACG CCCTCCTGCT GAAATATGAC AGCGTGCACG GCCCCTTCCC CGGCAAGATC AAGACGACGA AGTCGACCAT GGATCTCGGC CGCGGTCCGA TCAAAGTGCT CGCCGAACGC GATCCCGCGA AGCTCCCCTG GAAGGACCTC GGCGTCGATA TCGCGCTCGA ATGCACGGGT CTCTTCACCG CCCGTGAAAA GGCGGCGGCG CACCTCACGG CGGGCGCCAG GAAGGTGCTG ATCTCTGCAC CGGGCGAAAA TTCGGATCTG ACGGTCGTAT ACGGTGTGAA CCACTCGGCC CTGAAGAAGA GCCACAAGGT CGTCTCCAAC GCCTCCTGCA CCACAAACTG CCTCGCCCCC GTTGCTCAGG TCCTTCACAA GGCCTGTGGC ATCGAACAGG GCTACATGAC GACGATCCAC GCCTATACGG GCGACCAGAA CACCGTCGAT ACGCTTCACA AGGACCCGCG CCGGGCCCGC GCCGCCGGCG TCTCCATGAT TCCGACATCT ACTGGCGCCG CCAAGGCCGT CGGTCTCGTG CTGCCGGAAC TCCAGGGCAA GCTCGACGGC ACGTCGATCC GCGTACCCAC TCCGAACGTC TCGGTGATCG ACCTCGTCTT CACGTCCAAG AAAAAGACTA CGGCGGAAGA AGTGAACGCC GCCATCATCG CCGCCGCGAA GGGCCCCTTG AAAGGCATTC TCGCGACGAC GAACGAGCCG AACGTCTCGA TCGACTTCAA CCATAACCCG GCCTCCTCCA CCTTCGATCT GACGCAGACG CAGGTGATCG ACGGCAAGCT CGTGCGCGTG CTGAGCTGGT ACGACAATGA GTGGGGCTTC TCGAACCGTA TGGGCGACAC CGCTGTCGCC ATGGGCAAGC TTCTCTGA
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Protein sequence | MAVRVAINGF GRIGRLVLRA IAESGRKDIE VVAINDLGSV DANALLLKYD SVHGPFPGKI KTTKSTMDLG RGPIKVLAER DPAKLPWKDL GVDIALECTG LFTAREKAAA HLTAGARKVL ISAPGENSDL TVVYGVNHSA LKKSHKVVSN ASCTTNCLAP VAQVLHKACG IEQGYMTTIH AYTGDQNTVD TLHKDPRRAR AAGVSMIPTS TGAAKAVGLV LPELQGKLDG TSIRVPTPNV SVIDLVFTSK KKTTAEEVNA AIIAAAKGPL KGILATTNEP NVSIDFNHNP ASSTFDLTQT QVIDGKLVRV LSWYDNEWGF SNRMGDTAVA MGKLL
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