| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2104 |
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| Symbol | |
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| ID | 5454203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2286438 |
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| End bp | 2287109 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877681 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_001413375 |
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| Protein GI | 154252551 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.245468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.0211222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGACC CAGATCAGCG CCCCGCCTGC CGCCTCTATC TCATAACGCC GCCTCGCTTC
GAGCCGCGCG CCTTTGCCGA CACCTTCAAG GCTGCGCTCG ACGCCGGAGA CGTGGCCTCC
CTGCAGCTGC GCCTGAAGGG CGACAACGAG GCTCCGCCCG CCGCCGACGA TATCCGCTAT
GCGACCGAGA TACTGATGCC GCTGGCGCGA GAGCGCGACG TTGCCTTCAT CATCAACGAC
CGTCCCGATC TTGCCGCCGA ACTCGATGCG GACGGTGTTC ATGTCGGACA GGACGATATG
AGCTGCAGAG AAGCCCGCAA GCTTGTGGGT CCCGACAGGG CGGTGGGCGT CACCTGCCAT
TCGTCACGAC ACCTGGCTAT GGAAGCGGGA GAAGCAGGCG CGGATTACGT GGCGTTCGGT
GCCTTTTACG AAACCGACAC AAAAATCCCT ATAAGTAAGG CCGAACCTGA AATCCTCACC
TGGTGGGCGA ACCTCTTCGT CCTGCCATGT GTCGCAATCG GAGGCATCAC GGTGGCCAAC
GCCGCACCGC TCGTTCGCGC CGGCGCAGAT TTCCTGGCTG TATCTTCCGG CGTATGGGCG
CACGAAGATG GTCCGGCGGC CGCCGTGCGG AAGCTGAACG TCATTATGGC GGAAGAGAGT
GCTGCCCGAT GA
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| Protein sequence | MSDPDQRPAC RLYLITPPRF EPRAFADTFK AALDAGDVAS LQLRLKGDNE APPAADDIRY
ATEILMPLAR ERDVAFIIND RPDLAAELDA DGVHVGQDDM SCREARKLVG PDRAVGVTCH
SSRHLAMEAG EAGADYVAFG AFYETDTKIP ISKAEPEILT WWANLFVLPC VAIGGITVAN
AAPLVRAGAD FLAVSSGVWA HEDGPAAAVR KLNVIMAEES AAR
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