| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2103 |
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| Symbol | |
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| ID | 5455796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2285368 |
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| End bp | 2286441 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640877680 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001413374 |
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| Protein GI | 154252550 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0952151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.0177116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGGT TTTTGGTGGC ATTGTCATTT GCAGTTGTCA TGCCGCTCAT CGCAACATCC
GTCGCCGCCC AGGTAGCCCC TTCGCCGCGC GCCGAACGCA CCGCAGCCGC CGACGACAAG
ATGGGCCCGG CGCTCACGGC CTACCGCGCG GGACAGTTCG AAGCCGCGCG GCTTGCCGCA
CTCCCCTTGG CCCGGCAGGG CAATGTGACG GCCCAGCTCA TGCTCGGCTC GATCTACAAC
AATGGGGAAG GCATTGAGGC CGATCCGGAA GAGGCTGCAA AGTGGTTTGC CGAAGCAGCT
GCCCAGGGCA ATGCAGGCGC TCAATACGCG CTCGGCATGC TCATGGAATA TGACCAGATC
GCCGCCGGCA GCCCCGAAGC CGCGCGCCGT TACTTCGCAG CGGCGGCGGA GCAGGATCAT
CCCGCCGCCC AGGCCGAACT CGGCATGATG TATACGACTG GACATGGCGG TCCGAAGGAC
CTTGAGCGCG CGGCCAGCCT GTTCGAAAGC GCGGCGAAAA ACGGCAATGC GGACGCGCAA
TATTATCTTG GCACCCTCTT TGCCGCAGGG CGAGGCAAGG AGAGAAACCT CGACGAAGCC
GCGCGGCTCT TTACCCTCGC GGCAGACCAG GGGCACCCCC AGGCCGCCTA TCAGCTTGGG
CTGATGCATC AGGAAGGCAT TGCGGTTGAG AAAAGCGCCG GCAAGGCCGC CCGCCATTTT
GCTGCGGCCG CGGCCAAGGG CGTGCCCGGT GCCCAGACCT CGCTGGGGTT CGCCTATCTG
GGCGGCGAGG GCGTCGAGCG CAACGACACG CTGGCGGCGA AATGGTTCGC CGAAGCAGCG
ATGCGCGGCG ATCCGCTGGC ACAGGACCGC CTCGCGCGCC TCTATTTCCT TGGCCAGGGC
GTGGCACGGG ATGTCGCAGC CGCACTCCTC TGGCTGTCGC TCGCGGAACG GGGCGGCTTT
GAGGACGACA CGCTGCGAAA TGCGATGGAG CCCGAAATAA CCCCGGAAAT CCGCGCCAAG
GTCGAGGCCG ACCTTGCCAA ATGGGAAGCT GGCCGCCCCC CGGCAGCCAA CTGA
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| Protein sequence | MRRFLVALSF AVVMPLIATS VAAQVAPSPR AERTAAADDK MGPALTAYRA GQFEAARLAA
LPLARQGNVT AQLMLGSIYN NGEGIEADPE EAAKWFAEAA AQGNAGAQYA LGMLMEYDQI
AAGSPEAARR YFAAAAEQDH PAAQAELGMM YTTGHGGPKD LERAASLFES AAKNGNADAQ
YYLGTLFAAG RGKERNLDEA ARLFTLAADQ GHPQAAYQLG LMHQEGIAVE KSAGKAARHF
AAAAAKGVPG AQTSLGFAYL GGEGVERNDT LAAKWFAEAA MRGDPLAQDR LARLYFLGQG
VARDVAAALL WLSLAERGGF EDDTLRNAME PEITPEIRAK VEADLAKWEA GRPPAAN
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