| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2088 |
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| Symbol | |
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| ID | 5456557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2272120 |
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| End bp | 2272566 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640877665 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001413359 |
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| Protein GI | 154252535 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.179421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.00000500183 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGCCG AAATCCCGAA CCACAGCGAA GCGGGGCTGA AGCTTATCCG GAGCGTTTTT
GCCGGCGGCG GCTTCGGGCG CGGCATTGGC CAGACGCTCG GGCTTGTCGG CGTGTCGGCG
GATCCGGGTG CCGTGGTGCT GGCGGGCGAC CCGTCGGAGG ATCATCAGAA TCCGCTCGGC
ACCGTTCATG GCGGCTATGT CGCGACCTTG CTCGACGGCG CGATGGCGCT TGCGCTCCAG
ACATGTCTCG ATCCCGGTAC GCCTTATGCG ACGACCGACC TCAACATCAA TTATCTGCGC
GGCGTCAAAC TGAACGTGGG AACGGTCCGC GCGGAGGGCA GGGTGATCGA TCTCGGGCGG
TCGCGCGCGC TGGCGGAAGC ACGCCTCGTC GGTCCCGACG GACAGCTTCA CGCCTTTGCG
ACGGGGAGTT TTTCGGTCCG GCGGTGA
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| Protein sequence | MNAEIPNHSE AGLKLIRSVF AGGGFGRGIG QTLGLVGVSA DPGAVVLAGD PSEDHQNPLG
TVHGGYVATL LDGAMALALQ TCLDPGTPYA TTDLNINYLR GVKLNVGTVR AEGRVIDLGR
SRALAEARLV GPDGQLHAFA TGSFSVRR
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