Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2075 |
Symbol | |
ID | 5454217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2260194 |
End bp | 2261042 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640877652 |
Product | sulfate ABC transporter, inner membrane subunit CysT |
Protein accession | YP_001413346 |
Protein GI | 154252522 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0555] ABC-type sulfate transport system, permease component |
TIGRFAM ID | [TIGR00969] sulfate ABC transporter, permease protein [TIGR02139] sulfate ABC transporter, permease protein CysT |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00157073 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 1.0749900000000001e-24 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGACTGTTC TGTCTCTGCC GAAGCGGTCT CCCTCGGTGC TGCCGGGCTT CGGCCTGACC ATGGGGCTGA CGCTGACATG GCTAAGCCTC ATCATTCTCA TTCCGCTTGC CGGCGTCTTC ATCAAATCGG CGGGCCTTGG ATGGGATGCC TTCCTCGCGC TTGCCACCGA CGCGCGCACG GTCGCCGCGC TGAAGCTCAG CTTCGGTGCG GCGCTCATCG CCGCCGCGAT CAACGCGGTG TTCGGGCTGC TCGTCGCCTG GGTGCTGGTG CGCTACGACT TTCCGGGCCG CCGCATCGTC GATGCCGCGA TCGACCTTCC CTTCGCGCTG CCGACCGCCG TGGCCGGCCT CGCGCTCACC GCGCTTTATG CGCCGAACGG CTGGATCGGT TCGCTGATCG AACCGCTCGG CCTCAAGATC GCCTATAGCT CGGCGGGCGT CGTCATTGCG CTGGTCTTTA TCGGGCTTCC CTTCGTGGTG CGCACCGTGC AACCCGTGCT TGCCGATTTC GACAAGGAGC TGGAAGAGGC GGCGGCGACG CTCGGCGCCA CGCGGTTCCA GACCATAAGC CGCATCGTCT TTCCCGCGCT CATGCCGCCG CTTCTCACCG GCTTTGCGCT CGCCTTCGCG CGCGGCGTCG GCGAATACGG CTCGATCATC TTCATCGCGG GCAACATTCC CTATCGCTCG GAAATCGCAC CGCTGCTGAT CGTGATCCGG CTGGAAGAGT TCAACTATGC GGGCGCGACG GCCATCGCCG CACTCATGCT TGTCATTTCC TTCGCGCTGC TGCTCGTCAT CAACCTGCTG CAGGCGTGGA ACCGCCGCCG CATCGGCCTT GCCGGTTAG
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Protein sequence | MTVLSLPKRS PSVLPGFGLT MGLTLTWLSL IILIPLAGVF IKSAGLGWDA FLALATDART VAALKLSFGA ALIAAAINAV FGLLVAWVLV RYDFPGRRIV DAAIDLPFAL PTAVAGLALT ALYAPNGWIG SLIEPLGLKI AYSSAGVVIA LVFIGLPFVV RTVQPVLADF DKELEEAAAT LGATRFQTIS RIVFPALMPP LLTGFALAFA RGVGEYGSII FIAGNIPYRS EIAPLLIVIR LEEFNYAGAT AIAALMLVIS FALLLVINLL QAWNRRRIGL AG
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