| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2072 |
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| Symbol | |
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| ID | 5455644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2257537 |
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| End bp | 2258076 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640877649 |
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| Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
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| Protein accession | YP_001413343 |
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| Protein GI | 154252519 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
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| TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 2.90256e-17 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGCGA AAAAGCCGGA CGCGAAGCGG GCGAAAGCCC CCGCGAAATC CAAAGGGAAG
CCGCTGGTCG GCATCATCAT GGGCAGCCAG TCGGACTGGC CGACCATGCG CCATGCCGCG
GACGCGCTCG ACGCGCTGGG CGTGCCCTAT GAAGCGCGGA TCGTCTCGGC CCACCGGACG
CCGGAGCGGA TGTTCGACTA TGCGAAATCG GCCAAGGGTC GCGGCCTCAA GATCATCATC
GCGGGCGCGG GCGGCGCGGC GCATCTGCCG GGCATGACGG CCTCGCTGAC GCCGCTGCCG
GTCTTCGGCG TGCCCGTGCA ATCGAAGGCG CTGTCGGGCG AGGACAGCCT GCTCTCCATC
GTGCAGATGC CGGGCGGCAT TCCCGTCGGC ACGCTCGCCA TCGGCGAGGC GGGCGCGAAG
AATGCCGGGC TGCTCGCCGC CGCCGTGCTG GCGCTGTCGG ACGAGGCGCT GGCAAAGCGG
CTCGATGCCT ACCGCGCGAA GCAGACGGAC TCGGTGGGGC TGAGCCCGGA GGAGCGCTAG
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| Protein sequence | MAAKKPDAKR AKAPAKSKGK PLVGIIMGSQ SDWPTMRHAA DALDALGVPY EARIVSAHRT
PERMFDYAKS AKGRGLKIII AGAGGAAHLP GMTASLTPLP VFGVPVQSKA LSGEDSLLSI
VQMPGGIPVG TLAIGEAGAK NAGLLAAAVL ALSDEALAKR LDAYRAKQTD SVGLSPEER
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