| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2068 |
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| Symbol | |
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| ID | 5456358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2254427 |
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| End bp | 2255050 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640877645 |
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| Product | peptide deformylase |
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| Protein accession | YP_001413339 |
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| Protein GI | 154252515 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0000000000000124713 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCATAC GCAAGATCGC CCGCATGGGA CACCCCGTTT TGAGGGGAAT CGCCCGCCCC
GTCCCGGACC CCACGGCCCC GGAGGTGAAG GCGCTTGTCC GCGACATGAT CGAGACCATG
ATCGACGCCA ATGGGGCGGG GCTTGCTGCC CCTCAGGTCT ATGAGCCGTG GCGGATCGTC
GTCTTCCAGG CACCGGAAAG CCGCCTGCCC GAAGGGGTGG ACGAGACGGA GGCTTTCGAT
CACACGGCCC CCCTCACGGT CCTTATAAAC CCCGAGGTGG AGATCCTGAC AGAGGAGATG
GAAAAGGGCT GGGAGGGCTG CCTCTCGGTG CCGGGGCTTA GGGGCTCCGT GCCGCGCCAT
ACCGAGCTTC GCTACCGGGG TTATGGCCTC AATGGCGAGT TGATCGAGCG CCGCGCCAGG
GGCTTCCATG CCCGCGTCAT CCAGCATGAA TGCGACCACC TCGACGGCAT CCTCTATCCG
CAGCGGATGG ACGACCTCGC CGAACTCATC TTCGAGAGCG AGGCCCGCGC CTGGCTCGCC
GCGCGGGCGG AAAAAGCCGA GGCGGAAGAA GGCGGGGTAG GAGAGGGCGA GACGACAGAA
GAACAGGAGA AAGCCCATGC CTGA
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| Protein sequence | MAIRKIARMG HPVLRGIARP VPDPTAPEVK ALVRDMIETM IDANGAGLAA PQVYEPWRIV
VFQAPESRLP EGVDETEAFD HTAPLTVLIN PEVEILTEEM EKGWEGCLSV PGLRGSVPRH
TELRYRGYGL NGELIERRAR GFHARVIQHE CDHLDGILYP QRMDDLAELI FESEARAWLA
ARAEKAEAEE GGVGEGETTE EQEKAHA
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