| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2060 |
|---|
| Symbol | |
|---|
| ID | 5455505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 2247493 |
|---|
| End bp | 2248899 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640877637 |
|---|
| Product | NAD(P)(+) transhydrogenase (AB-specific) |
|---|
| Protein accession | YP_001413331 |
|---|
| Protein GI | 154252507 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1282] NAD/NADP transhydrogenase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.000000000258275 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCCA ATATAGCGGC TCTGCTGTAC GTCGTTTCAG CGGTTCTTTT CATCCTCGCG
CTGCGTGGCC TGTCCTCGCC CGAGACCTCC CGTCAGGGTA ACACCTATGG CATGATCGGT
ATGACGATCG CGATCGTCAC CACGCTGACC GTGCTGCAGG CGCAGAATAC GCTCACCTGG
ACGTTGATCG TCGTCGGTCT CGCCATCGGT GGCGGCATTG GCGCCATCAT CGCGCGCCGC
ATTGCCATGA CGCAGATGCC GCAGCTCGTC GCGGCCTTCC ATTCGCTGGT CGGTCTCGCG
GCGGTCTTCG TCGCCTGGTC GGCGTTCCTC GCGCCCGAGG CCTACGGCAT CGGTGCCTTT
CACGCGATCC ACGGCGCGAA CCTCGTCGAG ATGGGGCTTG GCGTCGCCAT CGGCGCGATC
ACCTTTTCCG GTTCGCTCAT TGCCTTCGCA AAGCTCAACG GCAACATGTC GGGTGCACCG
ATCATGCTGC CCGGCCGTCA CGTCATCAAT GCGGCGCTGG CGCTCGCCAT CGTCGGCGGC
ATCGGCTACA TCGTCGCGGA TCCGGCCAAC CAGACGACCG AGCTCTTTCT CGCCATCACC
ATCCTCTCCT TCATCATCGG TTTCCTGATC ATCATTCCGA TTGGTGGCGC CGACATGCCG
GTGGTGGTGT CGATGCTGAA CTCCTATTCC GGTTGGGCAG CGGCAGGCAT CGGTTTCACG
CTTGGCAATC TCGCGCTCAT CGTGACGGGC GCGCTGGTCG GCTCGTCGGG CGCGATCCTC
AGCTACATCA TGTGCAAGGG CATGAACCGC TCCTTCATCA GCGTCATTCT CGGCGGCTTC
GGCGCGGATA CGTCGTCGGC GGGTGGCGGC GCGGTCGAGA CGCGTCCCGT GAAGCAGGGC
TCGGCGGACG ATGCGGCCTT CATCATGAAG AATGCCGGCT CCGTCATCAT CGTGCCGGGC
TATGGTATGG CGGTGGCGCA GGCGCAGCAC ACGCTGCGTG AAATGGCGGA CATACTGAAG
GCCGAAGGCG TCAAGGTTTC CTACGCCATT CACCCGGTCG CGGGCCGCAT GCCGGGACAT
ATGAACGTGC TGCTCGCCGA AGCGAGTGTG CCTTACGACG AAGTGTTTGA ACTGGAAGAC
ATCAACAACC AGTTCTCCCA GGCCGATGTC GCCTTCGTCA TCGGCGCGAA CGACGTCACG
AACCCGTCCG CCAAGACCGA CACGGCGAGC CCGATCTACG GCATGCCCGT GCTCGACGTC
GAAAAGGCGA AGACGGTTCT TTTCGTGAAG CGCGGCATGG GTTCGGGTTA TGCGGGCGTC
GAGAACGAGC TCTTCTTCCG CGACAACACG ATGATGCTCT TCGGCGATGC GAAGAAGATG
GTCGAGGAAA TCGTCAAGAA TCTCTGA
|
|---|
| Protein sequence | MSANIAALLY VVSAVLFILA LRGLSSPETS RQGNTYGMIG MTIAIVTTLT VLQAQNTLTW
TLIVVGLAIG GGIGAIIARR IAMTQMPQLV AAFHSLVGLA AVFVAWSAFL APEAYGIGAF
HAIHGANLVE MGLGVAIGAI TFSGSLIAFA KLNGNMSGAP IMLPGRHVIN AALALAIVGG
IGYIVADPAN QTTELFLAIT ILSFIIGFLI IIPIGGADMP VVVSMLNSYS GWAAAGIGFT
LGNLALIVTG ALVGSSGAIL SYIMCKGMNR SFISVILGGF GADTSSAGGG AVETRPVKQG
SADDAAFIMK NAGSVIIVPG YGMAVAQAQH TLREMADILK AEGVKVSYAI HPVAGRMPGH
MNVLLAEASV PYDEVFELED INNQFSQADV AFVIGANDVT NPSAKTDTAS PIYGMPVLDV
EKAKTVLFVK RGMGSGYAGV ENELFFRDNT MMLFGDAKKM VEEIVKNL
|
|---|
| |