Gene Plav_2059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2059 
Symbol 
ID5453646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2247162 
End bp2247479 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content62% 
IMG OID640877636 
ProductNAD(P) transhydrogenase subunit alpha part 
Protein accessionYP_001413330 
Protein GI154252506 
COG category[C] Energy production and conversion 
COG ID[COG3288] NAD/NADP transhydrogenase alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00000000337997 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAGCGG CCGCAATCGA TCCATTCATC TTCCGGCTTG CGATCTTCGT GCTCGCGATC 
TTTGTCGGCT ACTACGTTGT CTGGAGCGTG ACGCCCGCGC TCCACACACC GCTCATGTCC
GTTACCAACG CCATCTCCTC CGTCATCATC GTCGGCGCGC TCATCGCGGT CGGCCTGGAT
GTCGCGCAGG CGGGCGAGGG GGGCTGGCTC TCCAAGATTT TCGGCTTCGT CGCCGTGGTC
CTTGCCGCCG TCAATATCTT CGGCGGCTTC CTGGTCACGC AGCGGATGCT GGCCATGTAC
AAGAAAAAGC AGCGCTGA
 
Protein sequence
MEAAAIDPFI FRLAIFVLAI FVGYYVVWSV TPALHTPLMS VTNAISSVII VGALIAVGLD 
VAQAGEGGWL SKIFGFVAVV LAAVNIFGGF LVTQRMLAMY KKKQR