| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2051 |
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| Symbol | |
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| ID | 5455667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2238359 |
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| End bp | 2239192 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877628 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001413322 |
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| Protein GI | 154252498 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0438316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0000220927 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATATCCC GGCTAATAGC GTTGGGTTCT TTCCTTGTGC TGGCTGGTTG CGGCACATGG
ACCGCCGAAT CGTACCTGCA TGAAGACATT CAGGGTGATT CCTTCAACGC TTGCCTGGCT
CGCGAATATC AGGACAGGGC GACTTCGGAA GCCTATGTCG ATTGCAACTG GGTCGATACG
GCCACGATCG TTGCCAAGGG CCGCGCTGCG GCTGCTGGCG AAACCGTTCT TCCTTTCGAC
CCCGCCACCA AAGGGGTTCT TTCGAGCGAT CTGCCTGAGC TGCAGGACGC CCGTTCCAAG
CTGATGTCCG CACTGGACAA TGGCGGCCGC ACCGATCGCG GCTGTGAATG CGCCAAGGCG
CAGCGCTACT ACGACGGTTG GGTCGAACAG GCGAGCGACA ACAAGCTCGG CGTGAACGGC
TCCTACTTCG GCGGCGAAGG CGGCCCGGTA CAGCCGGATC GCGTGGAAGC CGAGAAGGCC
GCGTTCTACG AAGCGCTCAC GGCTTGCGCC CTTCAGGCGC CGTCCGGTCC GTGGACCATC
TATTTCGGTT TCGACAAGTA TAACCTGACA CCGGAAGCGC AGTCGGTGAT CGATCAGATC
GTCGCTGAAA CGACCGGCCC GCTCTCGGTT ATCGGTCACA CCGATACGTC GGGCAGCAGT
GCCTACAACC AGGCACTCGG CCAGCGCCGT GCGGACTCCG TGTCCAACGC GCTGACGGCC
CAGGGCAAGG AACTCTGCAG CGCGGTTTCG CGCGGCGAGA CCGAGCTTGC CGTGCAGACG
GGAGACGGCG TACGTGAGCC GCTCAACCGC CGTGCGGTGG TTGCCGGCTG CTAA
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| Protein sequence | MISRLIALGS FLVLAGCGTW TAESYLHEDI QGDSFNACLA REYQDRATSE AYVDCNWVDT
ATIVAKGRAA AAGETVLPFD PATKGVLSSD LPELQDARSK LMSALDNGGR TDRGCECAKA
QRYYDGWVEQ ASDNKLGVNG SYFGGEGGPV QPDRVEAEKA AFYEALTACA LQAPSGPWTI
YFGFDKYNLT PEAQSVIDQI VAETTGPLSV IGHTDTSGSS AYNQALGQRR ADSVSNALTA
QGKELCSAVS RGETELAVQT GDGVREPLNR RAVVAGC
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