Gene Plav_2046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2046 
Symbol 
ID5455619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2231733 
End bp2232089 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content63% 
IMG OID640877623 
Producthypothetical protein 
Protein accessionYP_001413317 
Protein GI154252493 
COG category[K] Transcription 
COG ID[COG4190] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.00127106 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCACGT TGCGAGTGAG GATCGGAGAC TTCTCCGACA TGAAGTCGGG CTTCCTGCAA 
GCCTGGAAGG AAGCGGGTGG GGGCAAGCGC GTGAAGCCCC GCCACGAACT GATCTTCCGC
TCCTATGAAG ACATGCACCG CGTCCTCTCG CCCGCACGCC TCGAAGTCGT GAAAGCCCTC
GCGGGCCAGG GCCCGCTCAG CATGCGCGAA GTCGCCCGCC GCATCGGCCG CGACGTGAAA
GCCGTCCATG GCGACATAAC CGCCCTCATC AATTGCGGCA TGATCGACCG CACGGAAGAA
GGCGTGAGCT TTCCCTATGA TCGTATCCGG CTGGACGTGG ATATTGAGGC GGCGTGA
 
Protein sequence
MTTLRVRIGD FSDMKSGFLQ AWKEAGGGKR VKPRHELIFR SYEDMHRVLS PARLEVVKAL 
AGQGPLSMRE VARRIGRDVK AVHGDITALI NCGMIDRTEE GVSFPYDRIR LDVDIEAA