Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2046 |
Symbol | |
ID | 5455619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2231733 |
End bp | 2232089 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640877623 |
Product | hypothetical protein |
Protein accession | YP_001413317 |
Protein GI | 154252493 |
COG category | [K] Transcription |
COG ID | [COG4190] Predicted transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.00127106 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCACGT TGCGAGTGAG GATCGGAGAC TTCTCCGACA TGAAGTCGGG CTTCCTGCAA GCCTGGAAGG AAGCGGGTGG GGGCAAGCGC GTGAAGCCCC GCCACGAACT GATCTTCCGC TCCTATGAAG ACATGCACCG CGTCCTCTCG CCCGCACGCC TCGAAGTCGT GAAAGCCCTC GCGGGCCAGG GCCCGCTCAG CATGCGCGAA GTCGCCCGCC GCATCGGCCG CGACGTGAAA GCCGTCCATG GCGACATAAC CGCCCTCATC AATTGCGGCA TGATCGACCG CACGGAAGAA GGCGTGAGCT TTCCCTATGA TCGTATCCGG CTGGACGTGG ATATTGAGGC GGCGTGA
|
Protein sequence | MTTLRVRIGD FSDMKSGFLQ AWKEAGGGKR VKPRHELIFR SYEDMHRVLS PARLEVVKAL AGQGPLSMRE VARRIGRDVK AVHGDITALI NCGMIDRTEE GVSFPYDRIR LDVDIEAA
|
| |