Gene Plav_2038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2038 
Symbol 
ID5453457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2225698 
End bp2226333 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content61% 
IMG OID640877615 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001413309 
Protein GI154252485 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.400224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.00548732 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGGTCA TGAATGCCGA TACGATCGTG CTGGCAGAGG CAGGGCCCGG CGAACCGGAT 
CTCGCCGCCC GGCTCATCTA CGACACCGGC TCCTATGTTT TCGATTGTCT CTATGACCGG
GACTTCGAAG CCTTCCTGAA AATCACCGGG TTTCAATGGC AGCAGCAGGG CGGTGCCTTC
TCCCATGTTC ACGCCAGGGC GGCGCTCCAT GATGGAAATC TCGCAGGCAT CGCGCTCGGT
TTCCCGCAAA GCCTCTATGA GCAGGAATTC GGCACGGCCA TGATCGCGAT GGCGGAAAAG
GCGGGGCCGG ACCTCATCGC CCATCTCCCT TCCGTTGCGG GCCATATCCC ATGGCTCTTT
CCCGATGTGC CGGACGATGC CTGGTATCTG CTTTTTCTCT CCGCCCATCC GCAAGCGCGC
GGGCGGGGCA TCGGCGAGAA GCTTCTGGTC GATTGCTATG AGCGGGCACG CAAGGCTGGC
TGCGCCTCGC TCCATCTCGA TGTTGCCTCG GTCAATCCGG CACTGCGCTT CTATGAGCGC
ATGGGGCTGG AGAGGCTGGT GGAAAGCGCC GTGCCGAAAA TCGCGGCCTC ACACGGCGTG
CCTTCCCATA TCCGAATGGT GAAACATCTC GTCTGA
 
Protein sequence
MTVMNADTIV LAEAGPGEPD LAARLIYDTG SYVFDCLYDR DFEAFLKITG FQWQQQGGAF 
SHVHARAALH DGNLAGIALG FPQSLYEQEF GTAMIAMAEK AGPDLIAHLP SVAGHIPWLF
PDVPDDAWYL LFLSAHPQAR GRGIGEKLLV DCYERARKAG CASLHLDVAS VNPALRFYER
MGLERLVESA VPKIAASHGV PSHIRMVKHL V