Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2038 |
Symbol | |
ID | 5453457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2225698 |
End bp | 2226333 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640877615 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001413309 |
Protein GI | 154252485 |
COG category | [R] General function prediction only |
COG ID | [COG0456] Acetyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.400224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.00548732 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGGTCA TGAATGCCGA TACGATCGTG CTGGCAGAGG CAGGGCCCGG CGAACCGGAT CTCGCCGCCC GGCTCATCTA CGACACCGGC TCCTATGTTT TCGATTGTCT CTATGACCGG GACTTCGAAG CCTTCCTGAA AATCACCGGG TTTCAATGGC AGCAGCAGGG CGGTGCCTTC TCCCATGTTC ACGCCAGGGC GGCGCTCCAT GATGGAAATC TCGCAGGCAT CGCGCTCGGT TTCCCGCAAA GCCTCTATGA GCAGGAATTC GGCACGGCCA TGATCGCGAT GGCGGAAAAG GCGGGGCCGG ACCTCATCGC CCATCTCCCT TCCGTTGCGG GCCATATCCC ATGGCTCTTT CCCGATGTGC CGGACGATGC CTGGTATCTG CTTTTTCTCT CCGCCCATCC GCAAGCGCGC GGGCGGGGCA TCGGCGAGAA GCTTCTGGTC GATTGCTATG AGCGGGCACG CAAGGCTGGC TGCGCCTCGC TCCATCTCGA TGTTGCCTCG GTCAATCCGG CACTGCGCTT CTATGAGCGC ATGGGGCTGG AGAGGCTGGT GGAAAGCGCC GTGCCGAAAA TCGCGGCCTC ACACGGCGTG CCTTCCCATA TCCGAATGGT GAAACATCTC GTCTGA
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Protein sequence | MTVMNADTIV LAEAGPGEPD LAARLIYDTG SYVFDCLYDR DFEAFLKITG FQWQQQGGAF SHVHARAALH DGNLAGIALG FPQSLYEQEF GTAMIAMAEK AGPDLIAHLP SVAGHIPWLF PDVPDDAWYL LFLSAHPQAR GRGIGEKLLV DCYERARKAG CASLHLDVAS VNPALRFYER MGLERLVESA VPKIAASHGV PSHIRMVKHL V
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