Gene Plav_2025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2025 
Symbol 
ID5455220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2213047 
End bp2213172 
Gene Length126 bp 
Protein Length41 aa 
Translation table11 
GC content60% 
IMG OID640877602 
Productribosomal protein L36 
Protein accessionYP_001413296 
Protein GI154252472 
COG category 
COG ID 
TIGRFAM ID[TIGR01022] ribosomal protein L36, bacterial type 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.387216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.750795 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCC GTAACTCATT GAGATCGCTC CGGAATCGGC ACCGGGACAA CCGTCTCGTG 
CGCCGCAAGG GCCGCGTCTA CATCATCAAC AAGACAAACC GCCGCTTCAA GGCCCGCCAG
GGCTGA
 
Protein sequence
MKIRNSLRSL RNRHRDNRLV RRKGRVYIIN KTNRRFKARQ G