| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2020 |
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| Symbol | |
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| ID | 5457047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2208186 |
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| End bp | 2209535 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877597 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001413291 |
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| Protein GI | 154252467 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.34408 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAAG ACGAAGATAT CAGAACGGCG GAAACCGCTG CACCGGCCGC CAACCGGCCT
CTGCGTCCCT CCGATCCCGA CAGGCAGACT ACGCCGCAGG AGCGCAAGCG CGCCTTCTTC
ATCCTCTTCG TCTGCCTGCT CTCGGTCGGC ATGGGCCAGA CACTCGTCTT CGCCGTCCTG
CCCCCCATCG CCGCCGATCT CGGCATGTCC GAGTTCGAAA CGACGATGAT CTTTTCACTC
TCCGCCGCGC TCTGGGTGCT CACCAGCACC TTCTGGGGCC GCCGCAGCGA CGTCATGGGC
CGCAAGCCAG TCATCCTGAT TGGCGTTTTC GGTTTCGCTT TCTCTACTTC GCTTGTCGGC
TTTGTGCTGC TGGCCGGCTA TCAGCACTGG ATTTCGATGG TGTTGATGTT CCCGCTGGTC
ATGGGTGCGC GGGCGATCTT CGGTATTTTC GGTTCCGGCT CAATGCCCGC CTCGCAGGCC
TATGTCGCAG ACCGCACCAC GCGGGCCGAG CGGGCAGGAA GCATCGCGCA AATCGGCGCC
GCCTTCGGTC TCGGAACGGT CGTCGGCCCC GGCATCGCCG CAGCCTTCGC GGAAATCCAC
ATCCTCGCAC CTTTCTTCGC TGTCGGTGCG CTGGCCTTTG TCAGCGGCAT AGCGATCTGG
ATCCTGTTGC CGGAGCGTAC GCGGCCAAAG AAGATGCTTT CGGAGAAACA GGAAAAGCAG
GCCGCGTTGA AGTGGAGCGC GCCCAATGTC ATGCCCTGGC TCGTCATCGG CGTGATCCTC
AGCCTCAGCC AGTCGATCAT GATGCAGCTC TTCGCCTTCT ATCTGATGGC GGAGCTCGGC
ATGCAGGGGT CGGAAGCCAC GCAGCTTGTC AGCGTCGGCA TGATGGCCAT GGCGATGGCG
ACCCTCGTCG CGCAGCTCGG CCTCATTCAG CGGTTCGACC TCTCGGTGCA ATTCCTGCTG
CGCTGGGGTG CTGTCACCAT GATCCTTTCA TTCGCGATGC TGGTGTTCGG CGGCTCCTAC
GGCGTGCTTG TCTCGGCGCT GGCGCTTGCC GGTCTCGGCT TCGGCTTCCT GCGCTCCGGC
CTGTCCGCCG GCGCGTCACT CTCCGTTTCG CTGAAGGATC AGGGCGCGGT CGCAGGCCTC
ATCGGCTCGA CTGCGGCCAC CGGCCACATC CTCAATCCCG CCATCGGTAT CCCGCTCTTC
TACCTGCTGC ACTCGGCGCC CTTCATGCTT GGCATCGGCC TCATGGTGAT GATCCTCGCC
TTCGCGATCT TTCATCCGGT GCTGAAAAAT CTGCGCAGCG GCGATACGGG CCTGGTCGAC
GAGGAGGAAG AGGAGATCGG GCTGCACTAA
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| Protein sequence | MAEDEDIRTA ETAAPAANRP LRPSDPDRQT TPQERKRAFF ILFVCLLSVG MGQTLVFAVL
PPIAADLGMS EFETTMIFSL SAALWVLTST FWGRRSDVMG RKPVILIGVF GFAFSTSLVG
FVLLAGYQHW ISMVLMFPLV MGARAIFGIF GSGSMPASQA YVADRTTRAE RAGSIAQIGA
AFGLGTVVGP GIAAAFAEIH ILAPFFAVGA LAFVSGIAIW ILLPERTRPK KMLSEKQEKQ
AALKWSAPNV MPWLVIGVIL SLSQSIMMQL FAFYLMAELG MQGSEATQLV SVGMMAMAMA
TLVAQLGLIQ RFDLSVQFLL RWGAVTMILS FAMLVFGGSY GVLVSALALA GLGFGFLRSG
LSAGASLSVS LKDQGAVAGL IGSTAATGHI LNPAIGIPLF YLLHSAPFML GIGLMVMILA
FAIFHPVLKN LRSGDTGLVD EEEEEIGLH
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