Gene Plav_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2019 
Symbol 
ID5455582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2207300 
End bp2208088 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content64% 
IMG OID640877596 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_001413290 
Protein GI154252466 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.569659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAGG ATAAGAGCGA GCTGGAACTG CACCAGTTTT CGCATTCGCA CTACAATGAA 
AAGGTACGCT GGGCGCTCGA TTACAAAGGC CTGCCGCACT GGCGTCTGAA TTATCTGCCG
GGTCCGCACG CTGTCGCGAT CCGAAAAATG ACAGGCGCCA CGGAAACGCC GGTCCTGAAA
GTTGGCGGCC TGGTCGTTAC CGGCTCAGCC GCCATCATCG ATGCGCTTGA AGCGAGTTAT
CCGGCGTCAC CGCTTTATCC TGCCGGCCCG CAAGGCAAGG ATGCTGTGCT GGCCGTTCAA
TCCTTTTTCG ATACCGAAGT CGGCCCGCAA GTTCGTCGGG CTTTCTTTTC GGAGCTGGTG
CATGAGCCGG CCTATCTCTG CGCGATCTTT GCTTCCGGCA AATCGCTGCC CTCGCGCATA
TTCTACCGCG CTACGCTCGG TGTCGCGCGC GGTCTGATCA GGCGGCAGAT GGGTCTCGAC
CGGCCGGGTG CGACGGAGGA AGCATTCCAC GCCACGCAGT CGGCCCTGGA CAGGGTGGCG
GCACAAACAG CGTCCACCGG CTACATGGTG GGCGACAGCT TCACCGTCGC CGATCTTGCG
GCTGCGGCGC TTCTCGCGCC TGCCTGTGCA CCTTCCCACC CCGATATGGA ATTGCCGGTG
CCGCGCCCGC CGCGGGTCGA GGCCTGGCTG TCGCGCTGGG CGGCTCATCC CGGCGCCTCT
TGGGTGCGGG ACATGTACGA CCGTCACAGG CCGAAGCGAG TGCTGGCGCT CAGACACCCC
GCCGAGTAA
 
Protein sequence
MGEDKSELEL HQFSHSHYNE KVRWALDYKG LPHWRLNYLP GPHAVAIRKM TGATETPVLK 
VGGLVVTGSA AIIDALEASY PASPLYPAGP QGKDAVLAVQ SFFDTEVGPQ VRRAFFSELV
HEPAYLCAIF ASGKSLPSRI FYRATLGVAR GLIRRQMGLD RPGATEEAFH ATQSALDRVA
AQTASTGYMV GDSFTVADLA AAALLAPACA PSHPDMELPV PRPPRVEAWL SRWAAHPGAS
WVRDMYDRHR PKRVLALRHP AE