Gene Plav_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2013 
Symbol 
ID5455410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2199995 
End bp2201077 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content63% 
IMG OID640877590 
Producthypothetical protein 
Protein accessionYP_001413284 
Protein GI154252460 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.352291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAC AGCCGATCAT CGTGCACGGC CTCAGCCTTT CCTATTTCAC GGGCAAGATG 
GAAGCCTATC TGCGCGCGAA GGGTATTCCC TATCGTTTCG CGGAAATGGA CATGGCGTCT
TTCCGCCGCG CGGCGCGGGC GACTGGCATC GCCCAGATGC CGCAACTTGA AATGCCTGAC
GGCACATGGC TCACCGATAC GACGCGGATT ATCCGGCATT TCGAAAGCAC GGGGGCCGCG
CCCGCCTTGT CGCCGCGCGA TCCCGCTACC CATTTCATCA GTCTTTTGCT TGAGGACTAT
GGTGACGAGT GGTTGTGGCG GCCGGCGCTC TATTACCGTT GGCATTTTCC CGACGACATG
AGGCTGATGA GTGCCGCCAT TGCCTGCACG ATGATGCGCG ACCTGAAACT GCCGTTCTGG
CTCAGGCGGA GACTGATCCT GCAGCGCCAG CGCCGCGTCT ATCTCTCGCA GGATGGCGTG
ACCAAGGAAA CCGCGCCGCA GATCGAAGCG CTTTATCTCG AAACACTCGA TGCGCTTGAA
GCTGTCTTCG CGCGGCGTCC CTTTCTCATA GGAGAGCGTC CGGTGGAAGC GGATTTCGGC
TTCTTCGGCT CCATGTTCCG CCACTTCGCC AGCGATCCGA CGCCCGCCGC CATCATGCGC
GCCCGCGCCC CGCATGTGCT TGCCTGGGTG GCACGGATGT GGTCGCTGGC GCCGGCGGAT
TTCGCGGGCG CGCCTTTGCC CGATGCCGTT CCCGCCGATC TGGCGCCGAT CCTCAGAGAA
GCATGCGCCG CCTACCTTCC TTATCTGGCG GCGAACGATG AAGCGTTGAG GCGCGGCGCC
CGTCATGTCT CCTATGCGGT CGAAGGGGTG GGTTGGCAAT TGCCCGTCAA TCCCTACCGC
GCTCATTGCC TGGCGGCTCT GCGCGATGCA TATGCCGCAC TCGACACCGA AGCCCGTTCG
CGGGTCGATG CGGCGTTGGG CGGACCACAG GAAATTCTGA GCGCGCCGGC CATACATACC
GCGCCGATGC CGGCGGCGCC GGCAAAACCG GTCGACCGGC AATGGCGGAC CGCAAGAGGA
TAA
 
Protein sequence
MPEQPIIVHG LSLSYFTGKM EAYLRAKGIP YRFAEMDMAS FRRAARATGI AQMPQLEMPD 
GTWLTDTTRI IRHFESTGAA PALSPRDPAT HFISLLLEDY GDEWLWRPAL YYRWHFPDDM
RLMSAAIACT MMRDLKLPFW LRRRLILQRQ RRVYLSQDGV TKETAPQIEA LYLETLDALE
AVFARRPFLI GERPVEADFG FFGSMFRHFA SDPTPAAIMR ARAPHVLAWV ARMWSLAPAD
FAGAPLPDAV PADLAPILRE ACAAYLPYLA ANDEALRRGA RHVSYAVEGV GWQLPVNPYR
AHCLAALRDA YAALDTEARS RVDAALGGPQ EILSAPAIHT APMPAAPAKP VDRQWRTARG