| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2008 |
|---|
| Symbol | |
|---|
| ID | 5454238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 2196414 |
|---|
| End bp | 2197100 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640877585 |
|---|
| Product | glyoxalase/bleomycin resistance protein/dioxygenase |
|---|
| Protein accession | YP_001413279 |
|---|
| Protein GI | 154252455 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 83 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTCG CGAAACCGCG CATCGATGTC GGCCTCTTCA CCACCAATCT CGAACCGATG
CTCGACTTCT GGCAGAACGA AATCGGCCTG CCCTTCGACC ATCCTCTGCC GCTTGGCGGC
GGCCTGCAGC AGCATCGCCA TGACCTTCTG GGATCGGTGC TGAAAATCAA CCACGCGCGC
AACGCGCTGC CCGACGCATC GCCTTCCGGC TACCGGGAAT TGCTGATCGC GCGCGAAGGG
TTGCTCGGGC CCAAACGGCT GACCGACCCT GACGGCAATC TCGTGACGCT GGTGCCGTCC
GGCACCCACG GTATCGAGCG GATCGGCATT CGTCTCGGCG TCCGCGATGC CGCCGCGCAT
CGCCGCTTCT ATGCGGTCGC CCTCGGCCTG CCCGACGTGC CGGAGCGGGG CGGCGACAGC
TTTATATGCG GTGACAGCGT GATCCTGTTC GACGAGACGC CGGATGCAAG TGGCGATGCG
ATCTTCGAAG GCCCCGGCTT TCGCTATATC ACCATCCAGA TAAGAAACGT GGACGAGGAA
CATGCCGCCA TTCTCGCCCA CGGCGGCAAG GAAGGCCGCG CGCCGCAAAC GCTCGGCAAG
GTGGCGCGCA TCTCTTTCGT CCGCGACCCC GACGGCAACT GGATCGAGAT GTCCCAGCGC
GCCTCGCTTG TAGGCGCGCT GGACTAA
|
|---|
| Protein sequence | MDLAKPRIDV GLFTTNLEPM LDFWQNEIGL PFDHPLPLGG GLQQHRHDLL GSVLKINHAR
NALPDASPSG YRELLIAREG LLGPKRLTDP DGNLVTLVPS GTHGIERIGI RLGVRDAAAH
RRFYAVALGL PDVPERGGDS FICGDSVILF DETPDASGDA IFEGPGFRYI TIQIRNVDEE
HAAILAHGGK EGRAPQTLGK VARISFVRDP DGNWIEMSQR ASLVGALD
|
|---|
| |