| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1976 |
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| Symbol | |
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| ID | 5455227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2160036 |
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| End bp | 2160896 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640877552 |
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| Product | ABC transporter related |
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| Protein accession | YP_001413247 |
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| Protein GI | 154252423 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGACG AGCGGAAAGA TCTGGCAGGC GGCTATGGCG AGGGCACTGT CGGCACCATC
CTCTCCGCCG GCGATGTCGC GCGCGAGGCG GAAGCGATAG CGCGCACTGT GCCGCGAGAG
GAAATCCTCG CGCTCGCGAA GGGCGAACCG CTCCTTGCCA TCGACGCGCT TCATGCGGGC
TACGGCGCGA TGGAAATTCT CCACGGCATC GATCTCGCGG TCGGCAAGGG CCAGAGCCTC
TGCCTTGTCG GGCCGAACGG CGCGGGCAAG TCCACCGTCC TCCATTCCAT ATTCGGCTTC
ACGAAAATTT CGGCTGGCCG CATCCTCGCC GCCGGCCGCG ATGTCACCAG GCTTTCGCCG
AGTGAGAAGC TGCGCAGCGC CGGCATCGCC TACATCCTTC AGGATAATTC CGTCTTCCCC
GACATGACCG TCGAGGAAAA CCTGCTGATG GGCGGCTATC TCCTCGCCGA TAACGGCAAG
GCGCATGAAG CGGCGGAGCG TATCTTCTCG CATTACGGCC GCCTCGCGAA GCGCCGCCGC
GAGCGCGCTG GCGTCTTGTC CGGCGGCGAG CGCCGTCTCC TCGAAATCAG CCGCGCGCTC
ATTATGGAGC CGCAGGTCCT GCTGGTGGAC GAGCCCAGCA TCGGCCTCGA GCCGCGCATG
ATCGACATGG TGTTCGACAT CCTGCGCGAG TTGCAGCAGG AGCAGGGCAA GACGATCCTG
ATGGTCGAAC AAAATGCGCG GCGCGGCCTC GATTTCGCGG ATATCGGCTA TGTGCTGGTG
GCGGGCCGCG TGGCGCTGGC GGGCGAGGGG GCGGGCCTCC TTGAAAACCC GGATGTCGGC
CGGCTTTTCC TCGGCGGGTA A
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| Protein sequence | MADERKDLAG GYGEGTVGTI LSAGDVAREA EAIARTVPRE EILALAKGEP LLAIDALHAG
YGAMEILHGI DLAVGKGQSL CLVGPNGAGK STVLHSIFGF TKISAGRILA AGRDVTRLSP
SEKLRSAGIA YILQDNSVFP DMTVEENLLM GGYLLADNGK AHEAAERIFS HYGRLAKRRR
ERAGVLSGGE RRLLEISRAL IMEPQVLLVD EPSIGLEPRM IDMVFDILRE LQQEQGKTIL
MVEQNARRGL DFADIGYVLV AGRVALAGEG AGLLENPDVG RLFLGG
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