| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1973 |
|---|
| Symbol | |
|---|
| ID | 5454930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 2157444 |
|---|
| End bp | 2158346 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640877549 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001413244 |
|---|
| Protein GI | 154252420 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 75 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTCGACA ATCTGTTGCT CTTCTTCCAG TACCCGCCGC TCGCCGCCGA TGTCCTTCTC
AACGGCTTGC TGATCGGCGC CATCTTCGCG CTGGCGGCCT ATGGCATGGC ACTGGTCTGG
GGCGTGCTCG ACATCGTCAA TGTCGTGCAG GGCGAACTCG TCGTGCTCGG CGGCTATGTC
ACCTTCCTGC TCGTTCAGTC GGGCATGCCG CCGCTTCTCG GTGTGCCCGT TTCCGCCGTC
GTCATGTTCT GTTTCGGCTG GCTCGTCTAT CGCGTGGTCA TTTTCCGCGT CGTGGACAAG
GACATCTTCA TCTCCATTCT CGCAACCTTC GGTCTTTCCA TCCTGATCCA GCAGCTCGCC
AATCTCCTGT TCGGCTCCGA AGTGCGAACG GTTGATGCGG ATCTCGGCTC CCTTCACATG
CTCGATGGAA CGGTGACGCT TGCCTGGATC AAGATCCTCG CCTTCGGTCT GGCGCTTGTC
GCGGGCGGCA TGCTCTGGCT TTTCCTGCGT CATGCGCGGC TCGGTCAGGC CATTCGTGCG
ACGGCGCAGA ACCCGCGTGC CGCGCGCATT CTCGGCATCG ATACGAACCG TGTCTATGCG
ATGACCTATG CGCTCAATGC CGCTCTTTGC GGCGCGGCGG GCAGCCTCGC GGTCATGGCA
TGGACGATCC ACCCTTATGT CGGCCTGCCC TACACGGTGC GATCCTTCAT GGTCGTGGTC
GTCGCGGGTG TCGGCAATGT CGGTGGTGTC GTCGCGGCGG GGCTCGGTCT CGGCGCGCTG
GAGAATGCGG CAGGGTTCAT TCTCGGCGTC GAATTCCAGA TCGCCTTTGT CTTCGCGCTG
ATGGTCGTCA TTCTCGTCTG GCGCCATGCG CGCGCGGCGC GCAAGCGGAG CCATCTCCAA
TGA
|
|---|
| Protein sequence | MFDNLLLFFQ YPPLAADVLL NGLLIGAIFA LAAYGMALVW GVLDIVNVVQ GELVVLGGYV
TFLLVQSGMP PLLGVPVSAV VMFCFGWLVY RVVIFRVVDK DIFISILATF GLSILIQQLA
NLLFGSEVRT VDADLGSLHM LDGTVTLAWI KILAFGLALV AGGMLWLFLR HARLGQAIRA
TAQNPRAARI LGIDTNRVYA MTYALNAALC GAAGSLAVMA WTIHPYVGLP YTVRSFMVVV
VAGVGNVGGV VAAGLGLGAL ENAAGFILGV EFQIAFVFAL MVVILVWRHA RAARKRSHLQ
|
|---|
| |