Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1973 |
Symbol | |
ID | 5454930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2157444 |
End bp | 2158346 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640877549 |
Product | inner-membrane translocator |
Protein accession | YP_001413244 |
Protein GI | 154252420 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCGACA ATCTGTTGCT CTTCTTCCAG TACCCGCCGC TCGCCGCCGA TGTCCTTCTC AACGGCTTGC TGATCGGCGC CATCTTCGCG CTGGCGGCCT ATGGCATGGC ACTGGTCTGG GGCGTGCTCG ACATCGTCAA TGTCGTGCAG GGCGAACTCG TCGTGCTCGG CGGCTATGTC ACCTTCCTGC TCGTTCAGTC GGGCATGCCG CCGCTTCTCG GTGTGCCCGT TTCCGCCGTC GTCATGTTCT GTTTCGGCTG GCTCGTCTAT CGCGTGGTCA TTTTCCGCGT CGTGGACAAG GACATCTTCA TCTCCATTCT CGCAACCTTC GGTCTTTCCA TCCTGATCCA GCAGCTCGCC AATCTCCTGT TCGGCTCCGA AGTGCGAACG GTTGATGCGG ATCTCGGCTC CCTTCACATG CTCGATGGAA CGGTGACGCT TGCCTGGATC AAGATCCTCG CCTTCGGTCT GGCGCTTGTC GCGGGCGGCA TGCTCTGGCT TTTCCTGCGT CATGCGCGGC TCGGTCAGGC CATTCGTGCG ACGGCGCAGA ACCCGCGTGC CGCGCGCATT CTCGGCATCG ATACGAACCG TGTCTATGCG ATGACCTATG CGCTCAATGC CGCTCTTTGC GGCGCGGCGG GCAGCCTCGC GGTCATGGCA TGGACGATCC ACCCTTATGT CGGCCTGCCC TACACGGTGC GATCCTTCAT GGTCGTGGTC GTCGCGGGTG TCGGCAATGT CGGTGGTGTC GTCGCGGCGG GGCTCGGTCT CGGCGCGCTG GAGAATGCGG CAGGGTTCAT TCTCGGCGTC GAATTCCAGA TCGCCTTTGT CTTCGCGCTG ATGGTCGTCA TTCTCGTCTG GCGCCATGCG CGCGCGGCGC GCAAGCGGAG CCATCTCCAA TGA
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Protein sequence | MFDNLLLFFQ YPPLAADVLL NGLLIGAIFA LAAYGMALVW GVLDIVNVVQ GELVVLGGYV TFLLVQSGMP PLLGVPVSAV VMFCFGWLVY RVVIFRVVDK DIFISILATF GLSILIQQLA NLLFGSEVRT VDADLGSLHM LDGTVTLAWI KILAFGLALV AGGMLWLFLR HARLGQAIRA TAQNPRAARI LGIDTNRVYA MTYALNAALC GAAGSLAVMA WTIHPYVGLP YTVRSFMVVV VAGVGNVGGV VAAGLGLGAL ENAAGFILGV EFQIAFVFAL MVVILVWRHA RAARKRSHLQ
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