| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1971 |
|---|
| Symbol | |
|---|
| ID | 5455556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 2155558 |
|---|
| End bp | 2156022 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640877547 |
|---|
| Product | heat shock protein Hsp20 |
|---|
| Protein accession | YP_001413242 |
|---|
| Protein GI | 154252418 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 76 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGTT TCGACTTTTC CCCCCTTTAC CGCTCGACCG TGGGCTTCGA TCAGCTTCAA
TCGCTGCTCG ATTCCGTGAC CCATGAAACG GTCCCGACCT ATCCGCCCTA CAATATCGAG
CGGACCAGCG AAAACGACTA CCGGATTTCC GTCGCCGTCG CCGGCTTTGC CCAGGACGAT
CTCGACCTCG AGGTGAAGCA GAACGTGCTG ACCATCAGCG GCAAACGCGC CGAGCCTGAA
GGTGCGAACT ACCTTCACCG CGGCATTGCG GGCCGCAGCT TCGAGCGCCG CTTCCAGCTC
GCCGACCATG TCGAAGTGAA AGGCGCCCAT CTCGAAAACG GGCTCCTGCA TGTCGACCTG
GTGCGCCGCG TGCCGGAAGA GCTGAAGCCC CGCCGGATCG AGATTTCCGC GCCGGCCAAG
GGCCAGAAGA CGCTGGAAGG CAACCTGGCA ACCGCAGCGG ACTAA
|
|---|
| Protein sequence | MRSFDFSPLY RSTVGFDQLQ SLLDSVTHET VPTYPPYNIE RTSENDYRIS VAVAGFAQDD
LDLEVKQNVL TISGKRAEPE GANYLHRGIA GRSFERRFQL ADHVEVKGAH LENGLLHVDL
VRRVPEELKP RRIEISAPAK GQKTLEGNLA TAAD
|
|---|
| |