| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1964 |
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| Symbol | |
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| ID | 5456577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2142320 |
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| End bp | 2147062 |
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| Gene Length | 4743 bp |
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| Protein Length | 1580 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640877541 |
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| Product | glutamate synthase (ferredoxin) |
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| Protein accession | YP_001413236 |
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| Protein GI | 154252412 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.321687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCTGA AGTCCCAGGA GCAGGTCTGG GTGGAAGGAT TGATGGGTAT GACGCAGAAG
CGGGACGACA TGAGCCGGTA TCCGGCCACG CATCTGGCAG GACTGCCGGA AGCGCAGGGT
CTCTATGACC CCCGTAATGA ACATGATGCC TGCGGCATCG GCTTCGTGGC GAACATCCAC
AATCGAAAAT CGCACAAGAT GATCGAGGAT GGACTGCGCA TTCTCGAGAA CCTCGAGCAT
CGCGGTGCTG TCGGCGCCGA CCCCAAGGCG GGCGACGGCG CGGGCATCCT CATTCAGATT
CCGGACGCGT TTTTCCGCAA GGAAGCGAAG AAGCTCGGCT TCGAGCTTCC CGCGGAAGGC
CATTATGCCG TCGGCCACAT GTTCCTGCCG AAGGACCCGG CGGAGCGCCA GAAGATTTGC
ACGCTTGCCG AAAAGGTCAT CGTCGAGGAA GGCCAGGTCT TCCTGGGCTG GCGCGACGTG
CCTATCGACA ATTCGGATCT CGGCTATTCC GTAAAGCCGA CCGAGCCCTT CCACCGGCAG
GTCTTTGTCG GCCGCGGCAC GTCCTGCAAG GACCAGGATG CTTTCGAGCG GAAACTCTTC
GTCATCCGCA AGCGCATCTT CAACACGCTC TTCCATGAAG GCGGCACGAT ACCGAAGGGG
CTCTATATCG CCTCCCTTTC GTCGCGCACC CTTGTCTACA AGGGCATGCT GATGGCGGCC
CAAGTCGGCA AGTATTACAC CGACCTGACC GACCCCGACA TGGTGACGGC GCTTGCGCTC
GTTCACCAGC GGTTCTCCAC CAACACATTC CCGACCTGGA GCCTCGCGCA CCCCTTCCGC
ATGGTCTGCC ACAATGGCGA GATCAACACG AAGCGCGGCA ACGTGAACTG GATTCAGGCG
CGCTATTCGT CGATGCAGTC GGATCTTCTG GGCGACGACC TGAAGAAGCT TTGGCCGATC
GCCGTCGAAG GCCAGTCGGA CACGGCCTGC TTCGACAACG CGCTCGAACT TCTCGTCATG
GGCGGCTATT CGCTGTCGCA TGCGATGATG ATGCTCATTC CCGAAGCCTG GGCGGGCAAC
CCCCTCATGG ATGCGGAACG CCGCGCCTTC TACGAGTATC ACGCCGCGCT GATGGAGCCG
TGGGACGGCC CCGCCGCCGT GGCCTTTACC GATGGCCGCC AGATCGGCGC GACGCTCGAC
CGCAACGGCC TGCGGCCCGC GCGCTATTAC GTTACCGACG ACGGCGACGT GATGATGGCG
TCCGAAATGG GCGTACTGCC GGCACCTGAA GAAAAGATTG TCGAGAAGTG GCGCCTGCAA
CCCGGCAAGA TGCTGCTGAT CGACCTTGAG CAGGGCCGGA TCATTTCCGA TGCCGAAATC
AAGGCGCAGC TCGCGAAGCT CCATCCTTAT CAGGACTGGT TGAACGCGAC GCAGATCCAG
CTTGAAGACA TGCCGGCGCC CATCCTGCCG GCGACGCAGC CGACATATGC CTCGTTGCTC
GATACGCAGC AGGCCTTCGG CTACACGCAG GAAGACATCA AGTTCTTGAT GACGCCCATG
GCGATGGAAG GCCAGGAAGC CGTCGGCTCG ATGGGCACCG ACACGCCCAT CTCCGCGCTC
TCCTCGAAGT CGAAGCTGCT CTATACCTAT TTCAAGCAGA ACTTCGCGCA GGTGACGAAC
CCGCCGATCG ACCCGATCCG CGAAGAACTG GTGATGTCCC TCGTCTCGTT CATCGGGCCG
CGGCCGAACC TGCTCGACCT CGAAGGCATG TCCTCGGTGA AGCGCCTCGA AGTGCGTCAG
CCGATCCTGA CCAATGAGGA TCTCGAAAAG ATCCGCATGA TCGGCGAAGT CGCCGACAAT
CACTTCCGTA CGCAGACGCT CGACATCACC TATGATGTGA ACCGCGGCGC GGAAGCGATG
GCGGAAATGG TGGAGCGGCT CGGCGCACGT GCACAGGAAG CCGTGGAACA GGGCTACAAC
ATTGTCATCC TGTCGGACCG GCTGGTTTCG GCTGACCGTG TTGCCATCCC GGCTCTGCTC
GCGACCTCGG CCGTTCATCA CCATCTCATC CGGCAGGGCC TGCGCACGTC CGTCGGTCTC
GTCGTCGAAA CGGGCGAAGC GCGTGAAGTG CATCACTTCG CCTGCCTGGC GGGCTATGGC
GCCGAAGCGA TCAACCCCTA TCTCGCCTTC GAGACGCTGG CCAGCATGGT TCCGCATCTC
GACGAGGGCC TGACGCGCCG CGAAGTTGAA AAGCGCTACA TCAAGGCTGT CGACAAGGGC
CTGCTCAAGG TCATGTCCAA GATGGGCATC TCGACCTACC AGTCCTATTG CGGCGCACAG
ATTTTCGACG CCATCGGCCT GCGCAGCGAC TTTGCCGCCA AGTACTTCAC CGGCACCGTA
TCCATGATCG AAGGCGTCGG CATCGAAGAG ATCGCGGAGG AGACCATCCG CCGTCACCGC
CTGGCATTCT CCGACGCGCC TGTTCTGAAG AACGCACTTG AAGTGGGCGG CGAATATGCC
CTGCGCATCC GCGGCGAAGA CCACGCATGG ACCTCGGACA GCGTCCGCGA CCTGCAGCAT
GCCGTGCGCG GCAACAGCCA GGACAAGTAC CGTTCCTTCG CGCGCCAGAT CAACGAGCAG
AACGAGCGCC TGTTGACCAT CCGCGGCCTG TTCGAGATCA AGAACGCCGA AGACGACGGA
CGCAAGCCGA TTGCCGTCGA TGAAGTCGAA CCTGCCGTCG AGATCGTCAA GCGCTTCGCG
ACGGGGGCAA TGTCCTACGG TTCGATCAGC CGCGAGGCGC ACACCACGCT CGCCATTGCC
ATGAACCGCA TCGGCGGCCG CTCCAACACG GGCGAAGGCG GCGAGGAAGC CGACCGTTTC
GTGCCGATGC CGAACGGCGA CAGTATGCGC TCGGCGATCA AGCAGGTGGC CTCGGGCCGC
TTCGGCGTAA CGGCGGAATA TCTCGCCAAT GCCGACATGA TCCAGATCAA GATGGCGCAG
GGCGCAAAGC CCGGCGAAGG CGGACAGCTG CCTGGCCACA AGGTTGACGC GGTGATCGCC
AAGGTGCGTC ACTCGACGCC GGGCGTCGGC CTTATCTCGC CGCCGCCGCA CCATGACATC
TATTCGATCG AAGATCTTGC CCAGCTCATT TTCGACCTGA AGAACACGAA CCCCGCCGCG
CTCGTCTCAG TGAAGCTCGT GTCGGAAGTG GGCGTCGGCA CGGTTGCCGC CGGCGTTTCC
AAGGCCCGCG CCGACCATGT GACGATCTCG GGCTTCGAGG GCGGCACGGG TGCCTCGCCG
CTGACCTCCA TCAAGCATGC GGGTAGCCCC TGGGAAATCG GTCTCGCCGA GACGCATCAG
ACGCTTGTGA TGAACCATTT GCGCAGCCGC ATCACCGTGC AGGTCGATGG CGGGCTCCGC
ACCGGCCGGG ACGTCATCAT CGGTGCGCTG CTCGGCGCCG ACGAATTCGG CTTCGCCACC
GCTCCGTTGA TCGCGGCCGG CTGCATCATG ATGCGCAAGT GCCATCTGAA CACCTGCCCC
GTCGGCGTGG CCACGCAGGA CCCGGAGCTA CGCAAGCGGT TTGTCGGCAC GCCCGAACAC
GTCATCAACT ACTTCTTCTT CGTCGCCGAG GAAGTCCGCG AATTGATGGC GGCAATGGGC
TACCGCACGT TCAACGAAAT GATCGGGCAG ATGCAGATGC TCGACAAGCG CAAGGTCGTC
GAGCACTGGA AGGCGAAGGG GCTCGATTTC TCCAGGCTCT TCCACAAGCC GCCGCCCAGC
CCCGGCGTCG AAATCTACCG TTCGGAAGCT CAAGACCACC GGATCGACGA TGTCCTGGAT
CGCCGACTCA TTGCCGAGGC GCAGGATGCT ATCGAGCACA AGAAGCCGGT ACAGATCGAA
CTCCCGATCA ACAATACCGA TCGCGCGACG GGCGCCATGC TCTCCGGCGA AATCGCGAAG
CGGCATGGCC ATGCGGGCCT ACCGGACGAG ACGATCCATG TGAAGCTCAA GGGCACCGCG
GGCCAGAGCT TCGGCGCCTG GGTCGCAGCA GGCGTCACCC TCGAACTCGA AGGTGAAGCC
AACGACTATG TCGGCAAGGG CCTTTCCGGC GGACGCCTCA TTGTCTACCC GCCCGCCAAT
TGCCGCATCG TGCCGGAAGA AAGCATCATT GTCGGCAACA CCGTTCTCTA CGGCGCGATC
AACGGCGAAT GCTATTTCCG TGGCGTTGCC GGCGAGCGCT TCGCCGTCCG CAACTCCGGC
GCTATCGCCG TTGTTGAAGG CACCGGCGAT CACGGCTGCG AATACATGAC GGGCGGCATC
GTCGTCGTGC TCGGCGAAAC CGGCCGCAAC TTCGCGGCCG GCATGTCGGG CGGCATCGCC
TATGTGCTCG ACGAAGACGG CAAGTTCGAA CAACGCTGCA ACCTCGCCAT GGTCGATCTC
GAGCCGGTGA AGGAAGAGCA CGACATCATG GAGCGGCGTC GCCACCAGAC CGGCGATCTC
GAGAGCCACG GCCGTGTCGA CGTGATGAGC GACATGACCC GGTTCGATGC CGAGCGTCTG
CACCAATTGA TAGAGAACCA TGCGCATTAC ACGAATTCGT CTCGTGCGCA GGCTATTCTG
AATAACTGGG AAGCCATGCT GCCCAAGTTC CGCAAGGTGA TGCCGGTGGA ATACCGCCGC
GCCCTGAAGG AAATGCAGCG CGCGCAGGAA ACTGCGCAAG CCATGGCCGT AGCGGGAGAG
TAA
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| Protein sequence | MGLKSQEQVW VEGLMGMTQK RDDMSRYPAT HLAGLPEAQG LYDPRNEHDA CGIGFVANIH
NRKSHKMIED GLRILENLEH RGAVGADPKA GDGAGILIQI PDAFFRKEAK KLGFELPAEG
HYAVGHMFLP KDPAERQKIC TLAEKVIVEE GQVFLGWRDV PIDNSDLGYS VKPTEPFHRQ
VFVGRGTSCK DQDAFERKLF VIRKRIFNTL FHEGGTIPKG LYIASLSSRT LVYKGMLMAA
QVGKYYTDLT DPDMVTALAL VHQRFSTNTF PTWSLAHPFR MVCHNGEINT KRGNVNWIQA
RYSSMQSDLL GDDLKKLWPI AVEGQSDTAC FDNALELLVM GGYSLSHAMM MLIPEAWAGN
PLMDAERRAF YEYHAALMEP WDGPAAVAFT DGRQIGATLD RNGLRPARYY VTDDGDVMMA
SEMGVLPAPE EKIVEKWRLQ PGKMLLIDLE QGRIISDAEI KAQLAKLHPY QDWLNATQIQ
LEDMPAPILP ATQPTYASLL DTQQAFGYTQ EDIKFLMTPM AMEGQEAVGS MGTDTPISAL
SSKSKLLYTY FKQNFAQVTN PPIDPIREEL VMSLVSFIGP RPNLLDLEGM SSVKRLEVRQ
PILTNEDLEK IRMIGEVADN HFRTQTLDIT YDVNRGAEAM AEMVERLGAR AQEAVEQGYN
IVILSDRLVS ADRVAIPALL ATSAVHHHLI RQGLRTSVGL VVETGEAREV HHFACLAGYG
AEAINPYLAF ETLASMVPHL DEGLTRREVE KRYIKAVDKG LLKVMSKMGI STYQSYCGAQ
IFDAIGLRSD FAAKYFTGTV SMIEGVGIEE IAEETIRRHR LAFSDAPVLK NALEVGGEYA
LRIRGEDHAW TSDSVRDLQH AVRGNSQDKY RSFARQINEQ NERLLTIRGL FEIKNAEDDG
RKPIAVDEVE PAVEIVKRFA TGAMSYGSIS REAHTTLAIA MNRIGGRSNT GEGGEEADRF
VPMPNGDSMR SAIKQVASGR FGVTAEYLAN ADMIQIKMAQ GAKPGEGGQL PGHKVDAVIA
KVRHSTPGVG LISPPPHHDI YSIEDLAQLI FDLKNTNPAA LVSVKLVSEV GVGTVAAGVS
KARADHVTIS GFEGGTGASP LTSIKHAGSP WEIGLAETHQ TLVMNHLRSR ITVQVDGGLR
TGRDVIIGAL LGADEFGFAT APLIAAGCIM MRKCHLNTCP VGVATQDPEL RKRFVGTPEH
VINYFFFVAE EVRELMAAMG YRTFNEMIGQ MQMLDKRKVV EHWKAKGLDF SRLFHKPPPS
PGVEIYRSEA QDHRIDDVLD RRLIAEAQDA IEHKKPVQIE LPINNTDRAT GAMLSGEIAK
RHGHAGLPDE TIHVKLKGTA GQSFGAWVAA GVTLELEGEA NDYVGKGLSG GRLIVYPPAN
CRIVPEESII VGNTVLYGAI NGECYFRGVA GERFAVRNSG AIAVVEGTGD HGCEYMTGGI
VVVLGETGRN FAAGMSGGIA YVLDEDGKFE QRCNLAMVDL EPVKEEHDIM ERRRHQTGDL
ESHGRVDVMS DMTRFDAERL HQLIENHAHY TNSSRAQAIL NNWEAMLPKF RKVMPVEYRR
ALKEMQRAQE TAQAMAVAGE
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