| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1962 |
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| Symbol | |
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| ID | 5454138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2140099 |
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| End bp | 2140821 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640877539 |
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| Product | AzlC family protein |
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| Protein accession | YP_001413234 |
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| Protein GI | 154252410 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
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| TIGRFAM ID | [TIGR00346] 4-azaleucine resistance probable transporter AzlC |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCTG CCCTGCAAGA CTATGCCGAC GGCATTCGCG TGATGCTGCC CCTCATCCCG
GGTTCCATAC CCTTCGGCAT GATCGCGGGC GCGGTGGCGG CGGAGGTGAA ACTTTCTGCC
GCGCAAGGCA TAGGCGCATC CATCATCATG TTTGCGGGCA CGGCACAACT CGCCACCATG
CAGCTCATTG CAGAAAACGC GCCCGCCCTG GTCGTCGTCC TGACCGGGCT CGTCATCAAT
TTACGGTTTG CCATGTACAG CGCATCGCTG GCGCCTCACT TCGCCGGACT CTCCAGTGCG
AAGCGCAACC TGCTCGCCTA TGTGATGACG GACCAGTCCT ACGCTCTCAG CATCACGCGC
TTTGCACGTG ACAACGAAAT GAGCGGCGCG GCGAAATTCC GCTTCTATAT CGGCGGTGCG
CTCCTCATGT GGGTTTTCTG GATCGCCGCC ACCGCCGCGG GCTATTTTCT CGGCAACAAG
GTGCCGCCCA GCTGGTCGCT GGATTTCGTC GTACCGCTGA GCTTCCTCGC GCTTCTCGTT
CCCGGCATTC GAGATAGCTC GACGGCAACG GCCGCCGCTG TCGGTGCTGG CATCGCGGTC
GCTGCCTGGA CCCTGCCGTT CAACCTCGGA CTCTTCCTCG CAGCCATGTG CGGGATCGCG
GCAGGCTATA TCGTGGAAAA CAGGTCTAGC CGCAAGGACC TGGACGCCGG GAAGGATTTA
TGA
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| Protein sequence | MRPALQDYAD GIRVMLPLIP GSIPFGMIAG AVAAEVKLSA AQGIGASIIM FAGTAQLATM
QLIAENAPAL VVVLTGLVIN LRFAMYSASL APHFAGLSSA KRNLLAYVMT DQSYALSITR
FARDNEMSGA AKFRFYIGGA LLMWVFWIAA TAAGYFLGNK VPPSWSLDFV VPLSFLALLV
PGIRDSSTAT AAAVGAGIAV AAWTLPFNLG LFLAAMCGIA AGYIVENRSS RKDLDAGKDL
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