| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1952 |
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| Symbol | |
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| ID | 5456350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2130859 |
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| End bp | 2131989 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640877529 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001413224 |
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| Protein GI | 154252400 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCAA TCGCGGAACT CCTGAAGGAA GGCGCAGCCG CCGTCGGGCG GCCGCTTGCC
GATGCCCGCC TCCTGCCGTC CCGCTTCTAC ACCTCGACGG AGATATTCGA GGCCGAGAAG
GAACGGATCT TCCGCCGCAA CTGGGTCTCG GTCGGCCATG TCGCCGAAAT CCCGAAGCCG
GGCGACCGTT TCCGCATCGA CGTCGCGGGC GAACCCCTTC TCATCGTGCG CGGCCGTGAC
GGCGTCGTGC GCGCTCTCTC CGCCGTCTGC CGTCACCGCG CCATGCTGCT CGCGGAAGGG
GCGGGCAATG CCGGCACGAT TTCCTGCCCC TATCACAAAT GGACCTATGC GCTGGATGGC
GCGCTCATGG CCGCGCCGCT GATGGAGGGC GCCTCGCCGC TCGATGAAGC TGCCTGCGCG
CTCCCCTCCT TCGCCTGCGA GGTCTGGAAC GGTTTCATCT TCGTCAATCT CGACGGGCGT
GCAGCGCCGC TCGCCGCGGC CCTCGCGCCG CTTGGCGAAG AGCTGGCGCC CTGGAAGATG
GACGAGCTCG AAATCGTCGG CCGCGTCGTC TTCGATCAGC GATACAACTG GAAGGTGCTG
GCCGACAATT TCATGGAGGC CTATCACCAT TTCGCCATCC ACCCGGAAAC CTTCGAGCCG
AATTACCCGG CCGCCATGTC CCAAGCGGAT GAGGCGCGCG GCCCCTTCGC GGCATTGCGG
ATGCCGCACA AGGGTAATGA ACTCTCCGAA CCGCTCTTCC CGCCGCTGCC CGACATACCG
GACGAAGCGC GGCGCGGCTT CTCCGTCTTC AACATCTATC CCTCGATGCT GCTCGCCGTC
TTTGTGGACA CCGTCACCTG GTACCGCATG GAAATCGAAA GTGCCGGCAG CTTCCGCCTC
ACCATCTATC TCTTCGCCCA TCCCCGCTCG CTCGACGTGC CGGACGCGGA GGCGTTGAAG
GAATTTCTCC GCGAAGCGGC CACCGCTGTC CATATCGAGG ACATCGCCGC CTGCGAAGGC
GTTCAGAAAG GGCTTGAAAG CCGCATGGCG GTGCCCGGCC GCCTCAGCCC TCTCGAAGCG
GCGATCCACC AGCACCAACA ATGGCTGATG GGAGAGTTGG TCAAGGCGTG A
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| Protein sequence | MQPIAELLKE GAAAVGRPLA DARLLPSRFY TSTEIFEAEK ERIFRRNWVS VGHVAEIPKP
GDRFRIDVAG EPLLIVRGRD GVVRALSAVC RHRAMLLAEG AGNAGTISCP YHKWTYALDG
ALMAAPLMEG ASPLDEAACA LPSFACEVWN GFIFVNLDGR AAPLAAALAP LGEELAPWKM
DELEIVGRVV FDQRYNWKVL ADNFMEAYHH FAIHPETFEP NYPAAMSQAD EARGPFAALR
MPHKGNELSE PLFPPLPDIP DEARRGFSVF NIYPSMLLAV FVDTVTWYRM EIESAGSFRL
TIYLFAHPRS LDVPDAEALK EFLREAATAV HIEDIAACEG VQKGLESRMA VPGRLSPLEA
AIHQHQQWLM GELVKA
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