| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1943 |
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| Symbol | |
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| ID | 5454386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2119000 |
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| End bp | 2119743 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877520 |
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| Product | 20S proteasome A and B subunits |
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| Protein accession | YP_001413215 |
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| Protein GI | 154252391 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3484] Predicted proteasome-type protease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.65129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTTATT GTGTGGCCCT TCGGCTCAAG GACGGGCTGG TGATGCTGGC GGACACGCGC
ACCAATGCCG GCGTCGACAA CATCTCCACC TTCCGCAAGC TCTCCACGAT CGAACATCCC
GGCGAGCGCG TCATCGGCAT CATGACGGCG GGCAATCTCG CGGTCAGCCA GGCCGCCGTC
AACATGGCGG TGGAGCAGGG CGTGCGGGTG CGCGACGGCG ACGAACTGGA AACGCTGCAC
ACCGTGCCCA CCATGGTCCG CGCCGCCCAG CTCATGGGCC AGGCCGTGCG CGAGGTCTAT
CGCATCGACG GTCCCTCTCT CGAGGCGCAG GCGGGCGATT TCAATGTCTC GATCCTGATG
GGCGGCCAGG TCGGCAATGG CGAGATGCGC CTCTTCCAGG TCTATTCGGC GGGCAACTAT
ATCGAGGCGA CGGAAGACAC GCCCTATCTT CAGATCGGCG AGCACAAATA TGGCAAGCCC
ATCATCGACC GCGCGCTCAG CTACGACACT GCGCTGGGAG ATGGGCTCAA GCTCGCGCTG
ATCTCCATGG ATTCGACCAT GCGCTCCAAC CTCTCGGTCG GCATGCCGAT CGATCTCATG
GTCTATCGCC GCAACGCCCT CAAGGTCGCG ATGCAGCGGC GCATCAAGGA TGACGATGCC
TATTTCACCG GCCTCCGCCA TTCCTGGTCC GATGCGCTGA CGCAAGCCTA TCGGGCAATC
CCGGGCCCCG GCTGGGAATT CTGA
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| Protein sequence | MTYCVALRLK DGLVMLADTR TNAGVDNIST FRKLSTIEHP GERVIGIMTA GNLAVSQAAV
NMAVEQGVRV RDGDELETLH TVPTMVRAAQ LMGQAVREVY RIDGPSLEAQ AGDFNVSILM
GGQVGNGEMR LFQVYSAGNY IEATEDTPYL QIGEHKYGKP IIDRALSYDT ALGDGLKLAL
ISMDSTMRSN LSVGMPIDLM VYRRNALKVA MQRRIKDDDA YFTGLRHSWS DALTQAYRAI
PGPGWEF
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