| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1937 |
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| Symbol | |
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| ID | 5455200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2110780 |
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| End bp | 2112093 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640877514 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001413209 |
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| Protein GI | 154252385 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.204989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAG TCTGCATGAT CGGCGCGGGC AGCACTGTTT TCATGAAAAA TCTGGTGGGC
GACATCCTGC TGAACGAGAT GTTCGCGGAT TGCCACATCG CGCTGCACGA CATCGATGAG
GCACGGCTGA AAACTTCTGC CATCGTGGCG GGAAAGATCG CCGATGCGCT TTCGGTTTCA
CCCGAGATCA CCGCGACGAC GGACCGGCGC GAAGCTCTTG CGGGCGCCGA CTTCGTGATC
GTCATGATCC AGGTCGCGGG CTACAAGCCG GGCACGGTTG TCGATTTTGA AATTCCGAAA
AAGCATGGCC TGCGGCAGAC CATCGCCGAC ACGCTGGGCG TGGGCGGAAT CATGCGCGGA
CTGCGGACCG TGCCCGTGCT GCTCGATATC GCAAACGATA TGCGCGAGCT CTGCCCCAGG
GCGCTCATGT TGCAATATGT AAACCCGATG GCGATCAACT GCTGGGCGCT GAACCGGCTG
GCGCCCGACA TCGCCCATGT CGGCCTCTGC CACTCGGTGC AGGGTACGGC TTACGAACTC
TCCAAGGATC TCGATGTCGA CTACAAGTCG CTGCGCTATC AATGCGCCGG CATCAACCAC
ATGGCGTTCT ATACGAAATT CGAACGCGAA CTGCCGGACG GCACGCGCGA GGATCTCTAC
CCGAAACTGA AAGAGATTGC GGCGCGGGGC GAGGAACCGG GCTGGAACAA GGTACGCTAT
GAAATGCTCC GCCGGACTGG TTATTTCGTA ACCGAATCGA GCGAACACTT CGCCGAATAT
GTGCCGTGGT TCATCAAGCG CGACAGGCCG GACCTGATCG AGAGATTCAA CATTCCGCTC
GACGAATATA TCCGCCGCTG CGAGGAGCAG ATCGCGGCAT GGGACGCGCA GGAGCGCGAA
CTCGTTTCGG CGAACCGGCT GGAGGTGAAG TTCTCCGGCG AATATGGTGC GAAAATCATG
CGCGCGGTCG TGTCGGGCAA GCCCACCGTC ATCAACGGCA ATGTCGCCAA TAACGGCCTC
ATCGACAACC TGCCGGCGGG GGCCTGCGTG GAGGTGCCTT GCCTCGTCGA TGCGAACGGC
GTGACGCCGA CGCGGGTGGG AGCCCTGCCG CCGCAGCTCG CGGCGATGAT GCAGACCAAT
ATCAACGTGC AATCGCTGAC GATGGAAGCC ATAGCCACCG GCAAGCGCGA ACATATCTAC
CATGCCGCCA TGATGGACCC GCACACGGCG GCGGAGCTTT CGCTCGACCA GATATGGGCG
CTCGTCGACG ACCTGATCGA GGCACATGGC GACTGGTTGC CCGCCTACCG CTAG
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| Protein sequence | MTKVCMIGAG STVFMKNLVG DILLNEMFAD CHIALHDIDE ARLKTSAIVA GKIADALSVS
PEITATTDRR EALAGADFVI VMIQVAGYKP GTVVDFEIPK KHGLRQTIAD TLGVGGIMRG
LRTVPVLLDI ANDMRELCPR ALMLQYVNPM AINCWALNRL APDIAHVGLC HSVQGTAYEL
SKDLDVDYKS LRYQCAGINH MAFYTKFERE LPDGTREDLY PKLKEIAARG EEPGWNKVRY
EMLRRTGYFV TESSEHFAEY VPWFIKRDRP DLIERFNIPL DEYIRRCEEQ IAAWDAQERE
LVSANRLEVK FSGEYGAKIM RAVVSGKPTV INGNVANNGL IDNLPAGACV EVPCLVDANG
VTPTRVGALP PQLAAMMQTN INVQSLTMEA IATGKREHIY HAAMMDPHTA AELSLDQIWA
LVDDLIEAHG DWLPAYR
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