| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1925 |
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| Symbol | |
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| ID | 5453638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2096392 |
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| End bp | 2097912 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640877502 |
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| Product | sugar transferase |
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| Protein accession | YP_001413197 |
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| Protein GI | 154252373 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | [TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.962484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGGGT TTGGCGACCA GACAGACGAC GAGATCGTCC TCGCCGCACC GGGTGTAACA
GGTGACGTCG CAGCGGCCGC GCGCAGCAGC AGAGAGGCTT ATCCGGCCTC AGGCGACTTC
CTCAAAGACC AGCCCCTTAT CTCCAAGCAG GTGATTTCGG ATATCACCAT GTGTGCCGAT
GGCGTCATCA TCTTTGTCGC CGCTCTGATT GCTAAATGGG CCTATATCGG CCAGTTCCTC
GACCTTACGA GAAATTCAAC CCCCTACGCG GTCATCGGCG GGGTGGGCGC GGTCCTTGCC
GTTGCGATGC TGAAGTATCA GGGGATTTAT CAGTTCAACG CATTGAGCAA TGGGCGAGGC
CAGAAGAGGC GGATACTGAT AGGCCTCTTC GTCACAGCCT TGTTGCTCGT TGGTATCGGC
TATCTCTTGA AAATTTCGGA ACAATATTCC CGCGGCTGGT TTGTCGCGTG GTTCGGCCTA
TCCACGGTAC TTGTTCTGTC GCTTCATTTT GCCGGTTCGC GCTTCCTCCA ATGGCTGGTG
GCCCTCGGCT CCTTCGCGCG GAACGTTGTT ATTTATGGCA GCGGCGAAAT CGCGGAAAGC
GTCATACGCG GTATCGGTAC GTCCTCCATG AACCTTCGCG TGATAGGCGT CTTTGACGAC
CTGCCACCGG ACCAGATTCC CCGCGTTCCC GTGCGCGGTG GTCTGTCGGA TTTGATCGTT
TTCGGTCAGA AGCACAGGAT CGACGAGGTT CTGATTGCCA TGCCGCTGAC GAGTGAGCTG
CGAATTGCCA ATTTGGTGGA ACAGCTTTCC TTGTTGCCTA CCGACATCAG GATTTGTCCG
AGCGCTGCGG CATTCCGCAT TCCGCCCAAG GGATTGCTCA ACTATCAAGG GCTGGCGGTG
CTCGAGCTGG AGCGGCGTCC GATGGATGGC TGGGCTCCCA TCATCAAGAG CATTGAGGAT
CGCGTGCTTG CGGCGTTGCT GCTGATAGGC TTTGCGCCGC TGCTTCTTCT CGTTGCCGCC
GCAGTAAAGC TCGACAGCCG GGGGCCGGTA ATATTCAAGC AGAAGCGCCA CGGGTTTAAC
CACGAGGTTT TCAACCTTTA CAAGTTCCGG ACAATGTATG TTGCGGAAGG TAGTGGCCGC
GTCGTTCAGG CAACGCGTAA CGATCCGCGC GTAACCCGTG TCGGACGGTT TCTGCGCAAG
ACGAGCCTCG ATGAGCTGCC GCAGCTTTTC AACGTGCTCA TCGGCGAAAT GTCGCTGGTA
GGACCGAGGC CGCATGCCAT CGCGCACAAT GAGTACTACT CGGCAGTTCT CGATCGTTAT
GCGAACCGCC ACAAGGTGAA GCCCGGCATG ACGGGTTGGG CGCAGGTCAA AGGCTATCGA
GGCGAAACCG ATACGCCCGA AAAGATGCGC CGCAGAGTCG AGCATGATCT CTACTACATC
GAAAACTGGT CGGTGTGGCT TGATCTGAAG ATCATCATAA TGACGCCGTT CTACGGCTTC
ATCGGCAAAA ACGCCTTCTA G
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| Protein sequence | MRGFGDQTDD EIVLAAPGVT GDVAAAARSS REAYPASGDF LKDQPLISKQ VISDITMCAD
GVIIFVAALI AKWAYIGQFL DLTRNSTPYA VIGGVGAVLA VAMLKYQGIY QFNALSNGRG
QKRRILIGLF VTALLLVGIG YLLKISEQYS RGWFVAWFGL STVLVLSLHF AGSRFLQWLV
ALGSFARNVV IYGSGEIAES VIRGIGTSSM NLRVIGVFDD LPPDQIPRVP VRGGLSDLIV
FGQKHRIDEV LIAMPLTSEL RIANLVEQLS LLPTDIRICP SAAAFRIPPK GLLNYQGLAV
LELERRPMDG WAPIIKSIED RVLAALLLIG FAPLLLLVAA AVKLDSRGPV IFKQKRHGFN
HEVFNLYKFR TMYVAEGSGR VVQATRNDPR VTRVGRFLRK TSLDELPQLF NVLIGEMSLV
GPRPHAIAHN EYYSAVLDRY ANRHKVKPGM TGWAQVKGYR GETDTPEKMR RRVEHDLYYI
ENWSVWLDLK IIIMTPFYGF IGKNAF
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