| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1913 |
|---|
| Symbol | |
|---|
| ID | 5455028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 2082560 |
|---|
| End bp | 2083696 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640877490 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001413185 |
|---|
| Protein GI | 154252361 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.357961 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGATCT GCCACTACGA CGACACGAAT TCGAGTGGCG GGCTCGACAA GCAGGCGCGG
CTTTTGAGCC ACACCCTGCG CGATGGCGGG GAAGACGTGA TCATGCTGGC CAGTACGCGC
AAATATGCGC GGGCCGGCTG GACGGACGAC CGAGGCGTGC CGGTCCGCTA TTTCTGGACC
TATGCAAGCC CACAGGTTTC CGGGCGTTAT CTGCCCGCGG CGCTGATCTG GGCGGTGCAG
CTTTTCTTCT GGGTCTGGCG CAACCGGGCG AAGATCGACG TCATTCACGG TCATCAGATC
CGCATTCATG CCTTTGTCGG CGCGCTCGCG AACCGGTTTT TCGGCATTCC CGCCATTCTG
AAATCGGCCA CCGGCGGCGA GGGGGCGGAC ATCAAGGCGA TAGGGTCGCG CAAATATTTT
GGCGCGCCGG GCCGTAATTT CGTCATCCGG CACACCGATA TTTTCATCGC GACCACGAAA
TCGATCGAGG AAGATTTGCT GCGTTTCAAC GTGCCGGCCG AGAAAATCCG CATCATTCCC
AATGGTTTGC CGCTTGCGCC GCCCGCTCCC GGTGCGCCTG CGGAGGTCCG TTCGCGGCGC
GCCCTTTTCC TCGGCCGCCT GGCGCCCGAC AAGAACGCGC CGGAGCTTGC GCGTGCCGCA
TGTGAGCTTG CGGATGGCGC TTCGCTCACC GTCGATTTCT ACGGGCGCGG GCGCGAGTTG
CCGCAGCTTG AAGCGGCGCT GGCGGCGGCG GGCAATCCGG CCGTCACCTA TCGCGGCTTC
GTCGATCATC CGGGTACGAT CCTGCGGGAC TACGGCTATT TGCTGCTGCC CTCCAATGCG
GAAGGCCTCT CCAACGCGAT GCTCGAAGCG ATGGCGCATG GTGTCGTTCC GGTCGCAACG
CGGGTCAGCG GTTGTGTCGA TCACATCACA CCGGGGATAA CCGGCTTCTT TTTCGACAGC
ATTTCGCATG AGGATTTGCT GCGCGGTTTG CGGCTTGTCC CCGCCACCTC CGTTGAAGAA
TGGCAGCGCA TGTCGGCGGC GGCGGAGACT TATGCCCGGG CGCATTTCGA CATCAGCAAC
GTCGCCGGTT CCTACCGGCA GCTATACGGG CACCTCTCCG GCGGGCAGGC AGCATGA
|
|---|
| Protein sequence | MMICHYDDTN SSGGLDKQAR LLSHTLRDGG EDVIMLASTR KYARAGWTDD RGVPVRYFWT
YASPQVSGRY LPAALIWAVQ LFFWVWRNRA KIDVIHGHQI RIHAFVGALA NRFFGIPAIL
KSATGGEGAD IKAIGSRKYF GAPGRNFVIR HTDIFIATTK SIEEDLLRFN VPAEKIRIIP
NGLPLAPPAP GAPAEVRSRR ALFLGRLAPD KNAPELARAA CELADGASLT VDFYGRGREL
PQLEAALAAA GNPAVTYRGF VDHPGTILRD YGYLLLPSNA EGLSNAMLEA MAHGVVPVAT
RVSGCVDHIT PGITGFFFDS ISHEDLLRGL RLVPATSVEE WQRMSAAAET YARAHFDISN
VAGSYRQLYG HLSGGQAA
|
|---|
| |