Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1909 |
Symbol | |
ID | 5457009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2075938 |
End bp | 2077965 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640877486 |
Product | acyltransferase 3 |
Protein accession | YP_001413181 |
Protein GI | 154252357 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTCA GCGCCCCCGC TACCGGCAGC CCCGGCCTGA AATACCGCCG GGACATCGAT GGTCTTCGGT GCATCGCGGT GCTGTCCGTG GTTCTTTACC ATGCGGGCGT GCCGGGCATC ACCGGCGGCT TTGTCGGGGT CGATATTTTC TTCGTCATAT CGGGCTATCT GATTACCCGC ATTCTCTTTG ACGAGGTCGC GGAGAAGCGC TTTTCGCTGC TGAATTTCTA CGACCGGCGC ATCCGCCGCA TCCTGCCGGC CTATGCCGCC GCGGCCATTG CCGCCTCCCT CGCCGCCTGG TTCATCCTGC CGCCGGGCGA GATGGAGAAT TACGGGGCGA GGCTCGCCTC CACGGCGGCC TTCGTGTCCA ATTTCTATTT CAGGATGGAG ACCGATTATT TCGCGCCGGC GGCGGGCGAC AACCCGCTGC TGCATACATG GTCGCTGTCG GTCGAGGAGC AATTCTATTT GCTCTGGCCG CTCGCCATGG CGCTGCTGGC GACGTCTTTC TTTCTGCCTT TCCGCCGCGC GCTTGTCTGG CTTGCGCTGG GGGGCTCCTT CGCCCTTGCC TGCTACGCGG CGGTGGCGAG CCCGATGGCG GCATTCTATT ACTCGCCGCT GCGCGCCTGG GAGTTGCTGA TGGGTGCCGT CATTGCGCTC GGCTTTATGC CTGTATTCGA ACGCAGGACG AATGAAGGCC TGGCATGGGC GGGACTGGCG CTCGCCATCG CGCCCTGCTT CATCTATGTC AGTGGACAGA CGATCTTTCC CGGCCTCACG GCTCTCTTTC CCTGCCTCGG CGCGGCGCTC ATCATCATCT CCGGGCGGCA CGAGACGACC GCGGCGGGGC GGCTTCTTTC CTGGCGGCCG GTGGTCTTTA TCGGGCTCAT CTCCTATTCG CTTTACCTCT GGCACTGGCC GATCCTCGTC TATACGAAAA TCTATCTCTC CCGCGCATTG ACACCGGTGG AAATCGCGCT GGCGCTGGCG GTCATTCTCG CCGTGTCGGT GGCGAGCTGG CACTTCATCG AAAAACCCTT TCGCGGGCAC AGCGCCACGA CGCGAACCCG CAGCCGCATC ATCGGCACGG CGCTTGCGAC ACTCGCCCTT CTCTTCGCCG CCGGCATTGC GACCGATATA CGCGACGGCT GGCCGGGACG CGCGAGCGAG GCGACGCTGA TCGCGGAGCG GGAACACGAC GTTCCCGCGC GCGGGCCGAA GGGATGCGTG GTGGATGCGA ACAAGGCGGT GGAACCGCGC GGGCACGGCT GCCTGCTCGG CGCGGGCAGC GAGGCGGAAG CGCGCATGGT GCTGCTCGGC GATTCCCATG CCGGTTCCTA CGCCGCGGCC ATCGACGCGG CGGGCAAGGA GCGCGGCTTC GGCGCGCTGC AATGGACGAA ATCCGCCTGC ACGCCGCTTC TCGAGGCAGA ACCGCTTTCA ACCGGCATCC TCGAAGGCAA TTCGGACGGC TCCTGCCGCG CCTTCATGAA GAATGCCGTC GCGAAGCTCG CCGGCATGGA GAGGATCGAC ACCGTCTTCA TTGCCGGCTT CTGGTCGAAT GCAACGACCG ACCGGGAAGC CGTTGCCGCC CGCGCGCCGG CCGCACCCGA GACCTATCGC GAATTCGCCG AAGGCCTCCA GAGCCTCGTC TCAGCCCTGC GCGGCGCGGG CAAGAGGGTG GTGCTGCTCG GACAAGCACC GGTCTATCCG AATGGCGGCG GCGACTGCGT CATCCGCCAA CGCTTCCTGC AAAAGAACGA CAGGGAGATA TGCAAGGTGC CCCGCGCCTA TGAGGAAGCG ATGCTCTCGC CCGCCCACGC GGTACTCGCG GACATCGCGG CGAAGGATGA GGGCGTCCTC GTCTATCAGG GCTGGGAGAA GTTCTGCGAG GGCGCCTTCT GCCATGCGAC CTTTGACGGG CATATCGTGG TGCGCGACGA ACATCACATG AGCTACCTCG CATCGCGGAG CCACGCGCCG GGCATTGCCG TCCTCATCGA AGGGCGGCGG CGGGGAGGCA GGGGATGA
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Protein sequence | MSFSAPATGS PGLKYRRDID GLRCIAVLSV VLYHAGVPGI TGGFVGVDIF FVISGYLITR ILFDEVAEKR FSLLNFYDRR IRRILPAYAA AAIAASLAAW FILPPGEMEN YGARLASTAA FVSNFYFRME TDYFAPAAGD NPLLHTWSLS VEEQFYLLWP LAMALLATSF FLPFRRALVW LALGGSFALA CYAAVASPMA AFYYSPLRAW ELLMGAVIAL GFMPVFERRT NEGLAWAGLA LAIAPCFIYV SGQTIFPGLT ALFPCLGAAL IIISGRHETT AAGRLLSWRP VVFIGLISYS LYLWHWPILV YTKIYLSRAL TPVEIALALA VILAVSVASW HFIEKPFRGH SATTRTRSRI IGTALATLAL LFAAGIATDI RDGWPGRASE ATLIAEREHD VPARGPKGCV VDANKAVEPR GHGCLLGAGS EAEARMVLLG DSHAGSYAAA IDAAGKERGF GALQWTKSAC TPLLEAEPLS TGILEGNSDG SCRAFMKNAV AKLAGMERID TVFIAGFWSN ATTDREAVAA RAPAAPETYR EFAEGLQSLV SALRGAGKRV VLLGQAPVYP NGGGDCVIRQ RFLQKNDREI CKVPRAYEEA MLSPAHAVLA DIAAKDEGVL VYQGWEKFCE GAFCHATFDG HIVVRDEHHM SYLASRSHAP GIAVLIEGRR RGGRG
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