| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1903 |
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| Symbol | |
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| ID | 5456522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2068464 |
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| End bp | 2069129 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640877480 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001413175 |
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| Protein GI | 154252351 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTTGGA CTGCGGATTT TTTCGATTTT ATGCCCGGTG ACGGCAGCAG GTTTTTGGCC
GCCGGATGGT TGCGCCGCGC GGCGCTGGCG GCTGGCGGGC TGCTTGTCCT GGTCCTGCTC
TCCGCCTGCA CGGATGGTCC GCGGACCAAT GCGGCCGGCC CCGCTGCCGC CACCTCGGAG
GGCGACGTGC CTTTGCCGCC GGATGCCGAT ATCGATTACA AGCTCGGCTC GGGCGACAGG
CTCCGCGTCA TCGTCTTCGG CGAGCCGGAT CTTTCCGGCG AGTTCGATGT CAGCGGCTCC
GGCAGGGCGG CCCTGCCTCT CATCGGCCAG GTCCAGGCGG AAGGTCTTAC CCTCAGCACC
TTCGAGGATG CGGTCGAGCA GAAGCTGCAG GAAGGCTATC TGACCAGCCC GCGCGTCAGC
GTCGAGGTTC TGAATTACCG GCCCTTCTAT ATCTATGGCG AGGTGGGCGA ACCGGGACAA
TATCCATACA CGAGCGGCCT CACCGTGCTT AACGCGGTGG CCGTGGCGGG CGGCTATACC
TACCGGGCGA ACCAGAGCCG GGTCTACATC ACACGCGGCA CGGGCGACGA GGTCGAGTAT
CCGGCGAGCC AGGCCGTGAA GGTTCTCCCC GGCGACGTGG TCCGCGTGCC CGAGCGATTC
TTCTGA
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| Protein sequence | MRWTADFFDF MPGDGSRFLA AGWLRRAALA AGGLLVLVLL SACTDGPRTN AAGPAAATSE
GDVPLPPDAD IDYKLGSGDR LRVIVFGEPD LSGEFDVSGS GRAALPLIGQ VQAEGLTLST
FEDAVEQKLQ EGYLTSPRVS VEVLNYRPFY IYGEVGEPGQ YPYTSGLTVL NAVAVAGGYT
YRANQSRVYI TRGTGDEVEY PASQAVKVLP GDVVRVPERF F
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