| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1901 |
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| Symbol | |
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| ID | 5453828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2066258 |
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| End bp | 2067247 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640877478 |
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| Product | KpsF/GutQ family protein |
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| Protein accession | YP_001413173 |
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| Protein GI | 154252349 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0733049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCCCCGTC CCACCGACCA GAAAATCCCG GATACCCGCG CCGCCCATCT CGCCTCTGCC
CAGCGCACGC TGATGCTCGA AATCGAAGGG CTGAAGCAGC TCGCCGCCTC GCTTGACGGG
CCCTTCACGG AGGCGGTCGA ACAACTCGGC GAGGCCACCG GCCGCGTCAT CGTGACGGGC
ATGGGCAAAT CCGGCCATAT CGCCCGCAAG ATCGCCGCGA CCCTCGCCTC CACCGGCACA
CCGGCCCATT ACGTCCATCC CGGAGAGGCA AGCCATGGCG ACCTCGGCAT GATCACCTCG
GGCGACGTCA TCCTGGCGCT GTCCTGGTCC GGCGAGACGG CGGAACTCTC CAGCATCATT
TCGCACGCAA AACGGTTCGC CATCCCGCTC GTCGCCATGA CGGCGGAGGC AAAAAGCGCG
CTCGGCACCG CCGCCGATAT CGGCCTCTTC CTGCCGCGTG CCGAAGAGGC CTGCCCAAAC
AAGCTCGCAC CGACCACCTC CACCACCATG CAGCTCGCGC TGGGCGACGC GCTGGCGATG
GCGCTGCTCG AACGGAAAGG TTTTTCCGCC CGCGACTTCA GCGTTTTCCA TCCGGGCGGC
AAGCTCGGCG CCATGCTCCG CCATGTCTCC GAGGTCATGC ATACCGGCGA CGCCCTGCCG
CTGGCAGCGC CCGCCACCCC GATGTCCGAA GTCCTCCTCG TCATGTCGCA GAAGAGCCTC
GGCTGCGCCG GCATCGTGGA CGGCGCGGGC AAGCTTGTCG GCGTCATCAC CGATGGCGAC
ATCCGCCGCA ATTCGGGCGA GGGCCTGCTC GGGCGGAACG CGAGCGACAT CATGAACCGG
TCGCCGAAAA CGGTCGCCCC CGGCCTCCTC GCCTCCGAAG CGGTAAAAAT CCTCAACGAG
AAAAAGATCA CCAGCCTCTT CGTCGTCGAG GACGGACGGC CGGTCGGCCT GGTCCATATC
CATGATTTCC TGAAAGCGGG CGTCATCTAG
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| Protein sequence | MPRPTDQKIP DTRAAHLASA QRTLMLEIEG LKQLAASLDG PFTEAVEQLG EATGRVIVTG
MGKSGHIARK IAATLASTGT PAHYVHPGEA SHGDLGMITS GDVILALSWS GETAELSSII
SHAKRFAIPL VAMTAEAKSA LGTAADIGLF LPRAEEACPN KLAPTTSTTM QLALGDALAM
ALLERKGFSA RDFSVFHPGG KLGAMLRHVS EVMHTGDALP LAAPATPMSE VLLVMSQKSL
GCAGIVDGAG KLVGVITDGD IRRNSGEGLL GRNASDIMNR SPKTVAPGLL ASEAVKILNE
KKITSLFVVE DGRPVGLVHI HDFLKAGVI
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