| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1897 |
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| Symbol | |
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| ID | 5456559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2059470 |
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| End bp | 2060048 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640877474 |
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| Product | phosphoheptose isomerase |
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| Protein accession | YP_001413169 |
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| Protein GI | 154252345 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0279] Phosphoheptose isomerase |
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| TIGRFAM ID | [TIGR00441] phosphoheptose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.638192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.307075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGGCGCAC ACGATATTTT CCACGCCGCT TTCGACGAAC ACATGAAAGT GGCGCATGAG
ACGGCGAAAA AGCTCGAACA GGACTTCGCC GGCCTCGTGG CGGCCTGCTC CGAAGCGGTG
GCGGGCGGCG GCAAGCTGCT CTTTTTCGGA AATGGCGGCA GCGCGGCGGA TGCACAGCAT
ATTGCCGCAG AACTTTCCGT GCGCTTCATC AAGGACCGCC CGGCCATCGC CGCCATCGCG
CTCACGACCG ACACCTCGGT GCTGACGGCG GCGGCAAACG ACATGGGCTA TGAGCGCGTC
TTCGAACGGC AGATCGAGGC GCTGGGACGG CGCGGCGATC TCGCCATCGG CTTCTCGACC
TCGGGCAAGA GCCGCAACGT GGTTCTGGCG CTTGAGGCGG CGCGGAAGCA GGGCCTCGTC
ACCGCCGCCT TTGCCGGCGC CGAGGCGAAC CTCATGGAAG GTCTCGCCGA TCACATTCTC
TGCGTGCCGT CGAAAACCAC CGCCCGCATC CAGGAAATGC ACATCACGCT CGGCCACATG
CTGTGCGGCG CGCTGGAGGA ACAGCTCGGC TACGTCTGA
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| Protein sequence | MGAHDIFHAA FDEHMKVAHE TAKKLEQDFA GLVAACSEAV AGGGKLLFFG NGGSAADAQH
IAAELSVRFI KDRPAIAAIA LTTDTSVLTA AANDMGYERV FERQIEALGR RGDLAIGFST
SGKSRNVVLA LEAARKQGLV TAAFAGAEAN LMEGLADHIL CVPSKTTARI QEMHITLGHM
LCGALEEQLG YV
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