Gene Plav_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1890 
Symbol 
ID5454635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2049580 
End bp2050416 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content63% 
IMG OID640877467 
Producthypothetical protein 
Protein accessionYP_001413162 
Protein GI154252338 
COG category[S] Function unknown 
COG ID[COG3665] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03425] urea carboxylase-associated protein 2 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.70434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGG CATCATCCCG CAGCGAAACC GCAAGCCCCT ATGCGGCGAA CAAGGCGCGC 
TACGAAGCGC TTTACAGCGG CGCGAAAGCG AAGCGCCGGG ATTTCAGCGA GGCAAAAGGA
AATCCCGCCA CGCTGGACCC CGGCCTCATC ACTTTCCGGG AGACGGTTCC CGCCGGCTGG
GGCTGGTCCG GCCTCGTGCG GCGCGGCGAT ACGATGCGCG TCATCAACAC AGGCGGAACG
GCGGGCGTTT CGCTGCTGCT CTACAATGCC GCCGATCCGA CGGAGCGCTT CAACGCAGGC
GATACGGTGA AAATCCAGTG GACGGCACGG CTTTCGCGCG GGCGTGTCCT CTTTTCCGAC
ATGGGCCGGG TGCTTGCTTC CATTACCGAT GACAGTTTCG GCTTCAACGA TGCTCTCGCC
GGGGGCTCCA CCGCTCAAAC CAATAAAGAG AAATATGGCG ACGAGGCGCT CCGCAACACG
CGCGACAATT TCATTCTGCT CGCCGCGAAG CATGGGCTCG GCAAGCGCGA CGTGCCGCCT
TGTCTGACGC TTTTCGCGCC GGTCGGCGTC GACGCGTCAG GTCATCTCGC CTGGCAAGAC
AAGGGGGCGG CGGACGGCGA TTATGTCGAT CTTCGCGCTG AGCTCGACCT TCTCGTCTTT
GTGTCGAATG CACCGCATCC GCTGGCGCCC GGCGATTATG CGCCGAAGGA TATCGAGATC
GTCACATGGT CCTCGCCGCC ACCGGAGCGG GACGATTTCT GTCGGACGGC AACAGAGGAG
GCGCAACGCG GCTTCGACAA CAACGAGTAT TATCTCGCGC AGGGGAGGAA CGCCTGA
 
Protein sequence
MAEASSRSET ASPYAANKAR YEALYSGAKA KRRDFSEAKG NPATLDPGLI TFRETVPAGW 
GWSGLVRRGD TMRVINTGGT AGVSLLLYNA ADPTERFNAG DTVKIQWTAR LSRGRVLFSD
MGRVLASITD DSFGFNDALA GGSTAQTNKE KYGDEALRNT RDNFILLAAK HGLGKRDVPP
CLTLFAPVGV DASGHLAWQD KGAADGDYVD LRAELDLLVF VSNAPHPLAP GDYAPKDIEI
VTWSSPPPER DDFCRTATEE AQRGFDNNEY YLAQGRNA