Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1890 |
Symbol | |
ID | 5454635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2049580 |
End bp | 2050416 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640877467 |
Product | hypothetical protein |
Protein accession | YP_001413162 |
Protein GI | 154252338 |
COG category | [S] Function unknown |
COG ID | [COG3665] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03425] urea carboxylase-associated protein 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.70434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAGG CATCATCCCG CAGCGAAACC GCAAGCCCCT ATGCGGCGAA CAAGGCGCGC TACGAAGCGC TTTACAGCGG CGCGAAAGCG AAGCGCCGGG ATTTCAGCGA GGCAAAAGGA AATCCCGCCA CGCTGGACCC CGGCCTCATC ACTTTCCGGG AGACGGTTCC CGCCGGCTGG GGCTGGTCCG GCCTCGTGCG GCGCGGCGAT ACGATGCGCG TCATCAACAC AGGCGGAACG GCGGGCGTTT CGCTGCTGCT CTACAATGCC GCCGATCCGA CGGAGCGCTT CAACGCAGGC GATACGGTGA AAATCCAGTG GACGGCACGG CTTTCGCGCG GGCGTGTCCT CTTTTCCGAC ATGGGCCGGG TGCTTGCTTC CATTACCGAT GACAGTTTCG GCTTCAACGA TGCTCTCGCC GGGGGCTCCA CCGCTCAAAC CAATAAAGAG AAATATGGCG ACGAGGCGCT CCGCAACACG CGCGACAATT TCATTCTGCT CGCCGCGAAG CATGGGCTCG GCAAGCGCGA CGTGCCGCCT TGTCTGACGC TTTTCGCGCC GGTCGGCGTC GACGCGTCAG GTCATCTCGC CTGGCAAGAC AAGGGGGCGG CGGACGGCGA TTATGTCGAT CTTCGCGCTG AGCTCGACCT TCTCGTCTTT GTGTCGAATG CACCGCATCC GCTGGCGCCC GGCGATTATG CGCCGAAGGA TATCGAGATC GTCACATGGT CCTCGCCGCC ACCGGAGCGG GACGATTTCT GTCGGACGGC AACAGAGGAG GCGCAACGCG GCTTCGACAA CAACGAGTAT TATCTCGCGC AGGGGAGGAA CGCCTGA
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Protein sequence | MAEASSRSET ASPYAANKAR YEALYSGAKA KRRDFSEAKG NPATLDPGLI TFRETVPAGW GWSGLVRRGD TMRVINTGGT AGVSLLLYNA ADPTERFNAG DTVKIQWTAR LSRGRVLFSD MGRVLASITD DSFGFNDALA GGSTAQTNKE KYGDEALRNT RDNFILLAAK HGLGKRDVPP CLTLFAPVGV DASGHLAWQD KGAADGDYVD LRAELDLLVF VSNAPHPLAP GDYAPKDIEI VTWSSPPPER DDFCRTATEE AQRGFDNNEY YLAQGRNA
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