| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1852 |
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| Symbol | |
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| ID | 5453633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2011792 |
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| End bp | 2012415 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877431 |
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| Product | class II aldolase/adducin family protein |
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| Protein accession | YP_001413126 |
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| Protein GI | 154252302 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR03328] methylthioribulose-1-phosphate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.604682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.0869346 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAGTA TGGTGCCCCG GCTGGATTTT GCCGAAGCGG CGAAGGGCGT CATTGCGATG
GCGCGGTTTG CCGGCGCGCG GGGCTGGGTA CCGGCGACGA GCGGGAATTT TTCCGTCCGT
ATGAATGAGC TAAGCGCGGC GCTGACGGCC ACGGGCGCGA ACAAAGCCGA GCTGGACGAG
AATGGTGTGA TCGAGGCGGA AATCGCCGGG GCGAAGCATC CCCGAGCCTC CGCCGAAGCG
CCGTTGCATC TCGCCCGCTA CCGCGCAGCG CCCGGCATTG GAGCGATCTC TCACATGCAC
AGCATGGCGG CGACCGTCCT TTCGCGGCGG CATGCCGGGA CGGGTGCGGT GCGGCTTGAA
GGCTGGGAGC TGATGAAGGC GTTTGCCGGG GTCACGACGC ATGACATGTC GATAGATATC
CCCATCGTGC CGAACGACCA GGATACTGAC CGCCTTGCCG CCCTTGTCGA GGAGCGGCTG
GACAAGGACA GCATCTGCCC CGGTTATCTC ATTGCCGGAC ACGGCCTATA TGTTTGGGGC
GCGAGCGCCG CGGAGACGAT ACGCCATATG GAAGCTTTCG ATTTTCTGCT CACCGCCCAG
CTTCACGAGG AGAGCGCAAG ATGA
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| Protein sequence | MKSMVPRLDF AEAAKGVIAM ARFAGARGWV PATSGNFSVR MNELSAALTA TGANKAELDE
NGVIEAEIAG AKHPRASAEA PLHLARYRAA PGIGAISHMH SMAATVLSRR HAGTGAVRLE
GWELMKAFAG VTTHDMSIDI PIVPNDQDTD RLAALVEERL DKDSICPGYL IAGHGLYVWG
ASAAETIRHM EAFDFLLTAQ LHEESAR
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