| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1850 |
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| Symbol | |
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| ID | 5455710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2007271 |
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| End bp | 2010111 |
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| Gene Length | 2841 bp |
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| Protein Length | 946 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640877429 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001413124 |
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| Protein GI | 154252300 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3300] MHYT domain (predicted integral membrane sensor domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0866059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.191772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAGGG TCATTGGCTG CATCACTCAG GAACACGATC TAGGGCTCGT CGTTTTGGCG
GGCGGCTTGT GCCTGTTCGC CTGCTTCACC GCCATGAACA TGCTGGGCAG GGCCAAACTC
GCGCAGGGCC GAGTGCGGAC GCTCTGGCTG ATGGCGGCAG GGGGCGTAGC AGGAAGCGGC
ATCTGGGCGA CGCATTTCGT CGCGATGCTT GCGTTCAAGT CCATCCTGCC CGTGAACTAC
GAGATTGGCT TGACCTTCTT CTCCGCCTTG ATCGCCATCG TGTTGTGCGG GGTGGGGTTT
GCGATTGTTC TCGGGAGGCC CGGCCCCTTG GCCGGGGGTG CCCTGATCGG TGCGGCCATC
AGCGCCATGC ATTTCACGGG CATGACCGCC GTCCGGATTC CGGCCGATCC CGTCTGGGAT
ATGAACTATG TCGTCGCGGC CGTCGTCATC GGCGTACTGA CGAGCGCGGG CGCCATGCAT
GCCGCCATGC GCGTTCCTGC ACTTGGTGGC ATCTTGGTGG GATCGCTTCT CTTCACCATC
GCGATTTGCG CCACACACTT CACGGCAATG ACGGCGCTCA CCTATGTGCC GGACCCGACC
ATCGTCGTAA CGGATGTTGT CGCGGAACCC GGCATGATCG CCATCGCGAT CGCGACCGTT
ACATTCCTGA TCATTGCGCT CGGCCTGGTC GGCGCCTTGG TGGACAATTA TCTGGCTCAA
CGCGCGTCTG GTGAAGCGGA ACGCATGCGC GTCTATATCG CCGAACTCGA AGCGACAAAG
CAGGAATTGA TCGCCGCCAA GGATCAGGCT GAAGCGGGAA ATCGCGCCAA GTCCGACTTT
CTCGCCAATA TGAGCCATGA GATTCGTACG CCCATGAACG GCGTACTGGG CATGACGGAA
TTGCTGCTCA CCACGGCGTT GAACGCCGAG CAGCGAAAAT TCGCCGAGAC CGTTCGAGAG
TCCGGGGAAG CCTTGCTGAC CATCGTCAAC GATATTCTCG ATGTGTCCAA GCTGGAGGCC
GGTCGTCTCG AGCTCGATCA TATCGACTTC GATCTGGTCA ACACGGTCGA AAGCGCGATC
AGCCTGATGG CGGCGCGGGC GGCGGAAAAA CAGATCGATC TCGGCGCCTA TATCGAGCCG
GCCGCGCGGG GCATTTACCG CGGCGATCCC GCGCGTCTGC GCCAGGTCCT GTTGAATCTC
ATCGGCAACG CCATCAAGTT CACCGAGAAG GGCGGCGTCG CCGTGCGGGT GTCGGTTTAC
CGCGTCGAGG ATCCCCAGAC AAAGGCGTCT CATCTGCGTT TTGAAGTGCA TGACACGGGC
ATTGGCATTC CCGAGGACGT CTGCGGCAGG TTGTTTCAGA AATTCAGCCA GGCTGACAGC
TCCGTTACAC GGCGCTATGG CGGCACCGGC CTGGGTCTTG CGATCTGCAA GCAGATCGTC
GAATTGATGG ATGGCAATAT CGGCGTCAAC AGCCGGGTCG GGGCGGGTTC GACGTTCTGG
TTCCAGTTAT CGCTTGTACG CTCGGCCGCC CACCTGCCCG ATCTCAGCCG CCTGCCTGTC
TATCTCGAGA AGCTCAAAGT GCTGGTCGTC GATGACGTTC CAGTGAACCT CGACGTCCTG
ACCTCTCAAC TGGGCACCTA TGGCATTACC GTCACCAGAG CCGAAGATGG TTTTGCCGCG
CAGGCCGAGC TGGAAAGGGC ATGGCATGCC GGTCATCCAT ATGACATTGC CTTCCTCGAT
CAGATGATGC CCGGCATCTC GGGCGAAGAC CTTGCCTCGC GCATTCGCAA CAATCCCGAT
CTCGCCGATA TGAAGCTGGT ACTCGTCTCA TCGGCAGGCT CTCATGCGAG CAAGCTTCAC
GAGGAAAACG ACACGCTGGA TGCCCGCGTT GAAAAGCCGT TGAGGCAGCA TGAGCTGCTG
GATTGTCTGA TGCGCGTCTA TAGCGGAGCG CCGCTCGTCG ATTCGAGTTC AGCGCATAAT
CGAGACGTGC TTGAGGACGG CGCGGCGACG TCCGCCCGTA CCTTGCGGAT TCTGCTGGCG
GAGGACAACA AGATCAACCA GAAGGTCGCT CTGGCGATGC TCGAACAGCT GGGGCATAGC
GTGACCATTG CGGAGAACGG ATTGCAGGCC GTCGATGCCG TTCGCCGTGG GCATTTCGAC
GTGGTGCTCA TGGACATTCA GATGCCGGAG CTCGATGGCG TTGGCGCCAC GCGGGGCATT
CGAGCCTTGC CGGCGCCGAA ATGCGACATC CCCATCATCG CGATGACGGC CAATGCGATG
GAAGGCGCCG AGCGGAAATA TCTGGATTGC GGCATGGACG ACTACATATC CAAGCCGGTG
CGCCGGGACA TTCTTTTCGC CAAGCTTGCC AAAGTGTCCG CCGCGTTGCC CGCGCAGCCG
CCTGCGTCCG ACGCAGTCGC GAATGAAGAG CTATCCGGCG ATCCTGCCAC CTTGGCAATC
GAGGAAGGAC TCGCCGACCT CGATGTGGCG TCACTGGAGA ACCTTTTGTC TGTGCTCTCG
ATGTCGGATT TGCGAGAGTT GCTCGATCTC TATCTGAGCG ACACGGAAGA ACGGATTGCA
ACGATCCGGG AGGCGAACGG CCGTGCCGAT CTTGAGGGGA TGATGGCCGC TGCTCATGTC
ATTGTCGGAA CGGCGGGCGA AATCGGTGCC AGGCGGGAAA GCGCGGCCGC GCGGTTGCTT
GAAAAAGCAT GCCGGGCTGG CGACCTGGAC GCCGCGCACC GCCTTATGGA CACGTTGTTC
TCGGCTCATG ACGCGGCCTC TCGTGCGGTG CGCGGCTGGC TGGCGGCGAA TGCCGAGGCT
GTTCACGCTG TCCGTCTCTG A
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| Protein sequence | MLRVIGCITQ EHDLGLVVLA GGLCLFACFT AMNMLGRAKL AQGRVRTLWL MAAGGVAGSG
IWATHFVAML AFKSILPVNY EIGLTFFSAL IAIVLCGVGF AIVLGRPGPL AGGALIGAAI
SAMHFTGMTA VRIPADPVWD MNYVVAAVVI GVLTSAGAMH AAMRVPALGG ILVGSLLFTI
AICATHFTAM TALTYVPDPT IVVTDVVAEP GMIAIAIATV TFLIIALGLV GALVDNYLAQ
RASGEAERMR VYIAELEATK QELIAAKDQA EAGNRAKSDF LANMSHEIRT PMNGVLGMTE
LLLTTALNAE QRKFAETVRE SGEALLTIVN DILDVSKLEA GRLELDHIDF DLVNTVESAI
SLMAARAAEK QIDLGAYIEP AARGIYRGDP ARLRQVLLNL IGNAIKFTEK GGVAVRVSVY
RVEDPQTKAS HLRFEVHDTG IGIPEDVCGR LFQKFSQADS SVTRRYGGTG LGLAICKQIV
ELMDGNIGVN SRVGAGSTFW FQLSLVRSAA HLPDLSRLPV YLEKLKVLVV DDVPVNLDVL
TSQLGTYGIT VTRAEDGFAA QAELERAWHA GHPYDIAFLD QMMPGISGED LASRIRNNPD
LADMKLVLVS SAGSHASKLH EENDTLDARV EKPLRQHELL DCLMRVYSGA PLVDSSSAHN
RDVLEDGAAT SARTLRILLA EDNKINQKVA LAMLEQLGHS VTIAENGLQA VDAVRRGHFD
VVLMDIQMPE LDGVGATRGI RALPAPKCDI PIIAMTANAM EGAERKYLDC GMDDYISKPV
RRDILFAKLA KVSAALPAQP PASDAVANEE LSGDPATLAI EEGLADLDVA SLENLLSVLS
MSDLRELLDL YLSDTEERIA TIREANGRAD LEGMMAAAHV IVGTAGEIGA RRESAAARLL
EKACRAGDLD AAHRLMDTLF SAHDAASRAV RGWLAANAEA VHAVRL
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