| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1849 |
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| Symbol | |
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| ID | 5454488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2002536 |
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| End bp | 2006915 |
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| Gene Length | 4380 bp |
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| Protein Length | 1459 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640877428 |
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| Product | hypothetical protein |
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| Protein accession | YP_001413123 |
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| Protein GI | 154252299 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5635] Predicted NTPase (NACHT family) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.873254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.366446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGA GTAAAAACAG GGACGATTTC TCTCAGGCGA CCAAGAATCG CCTAGCAAAG
CAAGCCCGGT ATCATTGTAG CAATCCAAGT TGCAGGAAGC TGACGTCAGC GCCGACCAGC
GATGGCTCAA AGGAAGTGAA TATCGGAGTT GCCGCTCATA TCTGTGCTGC AGCCCCCGGA
GTTGGTGCGC GCCGCTATCG CGCCGATATG ACCCCAGAGC AACGGAAATC GCATGAGAAT
GGGATTTGGC TTTGCCAGGA CTGTGCAAAG GCGATTGATT CAGATGATCC CATTTTTACC
GAGGCGTTTC TGCATACCTG GAAGCAGAAG CACTCTGAGG ACATGTGGCG CAGCATTATC
GACAAGCTTG CCTTCGGTCC GACCATGCCG CCGACGTTTT CGGAAATCAG TGCACGCTTT
CAAAAAGCTG CCGCTGCGGA CTTGGCCGTG TTCCGTCGAA CACCCAAATG GCCGGGCACG
AACGTAGCGC TCACGCTGAC GTTAAAGGTG AAGCACGTGG ACGAGGCGCT CAGCACGCGC
GCGCTTGCCA ACGCCGTGAC CACGCTGGAT GACCTTATCC TTGTCGCGGC ACCCGGAATG
GGAAAGACGA CAACCCTCTT TCAGGTCGCC GATGGTCTGT TGGAAATCGG CAACGGCACG
CCACTCATCG TACCGCTGGG AGATTGGGCC ACCGAAGGCG GAGCGCTGCT CGCATCCATT
CTCAAACGAC CTGCGTTCAA CGGAATTTCA GAGCAGGATT TCCGCGCCGT CGCCACGAAA
CCCGGCGTCG TGCTACTTCT TGACGGTTGG AACGAACTGG ATGCCGCCGC ACGCGAACGC
GCGCGCGTGC AAATCACTGC TCTCAAGGCT GAATTGCCGG AGCTCGGTCT TGTCATTTCC
ACGCGCAAAC AGGCCCTCGA CATTCCGTTC GGCGGGACGC GGGTCGATTT ACTGCCGCTT
GACGACGAGC AGCAAATGGA GATCGCGCGC GGCATGCGGG GCGAGGCTGG CGTACAACTC
GTCGATCAGG CGTGGCGGAC AGCGGGTGTC CGGGATCTTG TGACCATCCC ACTCTACCTC
ACGGCACTTC TTTCGCTGCC AGAGGGCGCG CCTTTTCCGA CAACAAAGGA AGAAGTGCTA
CGACGCTTCA TTGCCGCACA CGAGCAGGAA GCCCGCCGTG CGGCGGCGCT TCATGCCGTG
GCCCTCGGCT TCCAGCAGGA CTATTTGGAT GGCCTCGCCG TGTTCGCCAC GACAACGGCC
AACACGGCGA TCACGGACAG CAACGCGCGC AAATCGGTCG CTGAGACCGC GCGGGTCTTG
GTGGACGACG GACAAATCAC CATCTCCACA CAACCCGACA CGTTGCTCGA CACGCTTGTC
AGCAATCATG TTCTGACGCG CTCCGGCGAC ATGCCGGGCT ACTCATTCCA GCACCAGCAA
TTTCAGGAAT GGTACGCCTC GCACTACGTC GAGCGACTGA TGCTACAGGC CGTTAGCGAT
CCAGCAGCAC GCGAGAATCT GAAGGTAGAC GTGCTCGATC AGCGCCCGTG GGAAGAAGCA
GTCCTGTTCG CTGTCGAACG AAGCGCGCGC GGCGACGCCG TACATAAGGC CGCATGCAGT
GCCGCCATCC GCGCGGCCTT TGAAGTCGAT CCTGTCCTCG CGGGCGAGAT GATCTTCCGC
GCCACCGACG AGGTATGGGC ACCGATCGGC ACCGAAATGC GGAACCTCGC CGAGCAGTGG
CACGCGCCAG GCAAGGTGGA TCGCGCGGTG CGTTTCATGG TCGCGTCCGG CAGGCCGGAA
TTCGGCGATC TTCTTTGGCC GCTTATTTCG CACGCGAACA CCCAAGTGCA CTTGTCCGCT
CTCCGGGCGG CGAAGCGATT TCGCCCATCC GTGCTTGGGA ACGACGCGCC GGTGCGCATC
GCAGCGCTGC CACCGGAAAT CCGCAAGAAC GTACTGCATG AAATTGCATC GCATGGCGGA
ATCGACGGCC TCGACCTTGC GACCGCAATC GCGAAGACTG ACGGCGACCC GGACGTGAAG
GCGACAGTGG TCGATGCGCT TTCATTTCGG CGAGCGGATC GCCACGTCGC CGACTTGCTC
GCTGACGCCG GCGACGCGAC CTACGACATC CTCGCCGAAA AGGGTCACCT CGACGATATT
GCAGTCGATG CCGTCCAGCG GGAACTCCAG CGCGCGCGTG AGCGGCGCAA AGCTTTTGGC
ACTTCGCACT TCCAGCGCCT GCGCACGCTC GTCTACGCGC CGGAGGGAGA TGATCGCGAT
GCCGAGGTCG CTGAGATTGT TGCTGAAATG GAGATCGACC GGAAGCGCGA TGGCGAATTC
CACCTTTTGT ATGAAGTGCG AAAACGCTAT CCGCATGCTC TCGCTAAGGG GTTGCTGCGT
CGCGTGCGCG AGCACCGAAA TCTCTTCTAC GGCGCGGACA ATATTCTTGC CGCCGCCGGG
TTTTCCCTTG AGGACGACAA GCTGCTCGGA ATTTCCCTCG AAGAGACAAA CCGCCACGAC
GACCGCGCTG AAGCTGCCGC CTCAGTGCTA GGACCAATCG CTGTCGGACG GCTGATCGAC
GCGTATCTTG CCGCTGGGAA AGTCGTGCGC GACGCCAGCG GGAAATACGA TCAGTCTGCG
GGTGATCGCT ATCACGGTCT GCGAGACCGT ATCGGCCACA CGCCGGGCGC AAGTTTGGTG
GCTGCCGTTC AGGCGCGGGC GGCAGATGCC GATAATGAGG AAATCGTCCA ACTGGCCGAG
CTGTTTTCCC GCGAGACCAA CGGTGACGAA GAACGGGCGC GACCCTTTAG CGAAGAAGGC
TTGGCTGCAA TCGGTGTGCT CGCGCGCAAA TGGGCTGAGC GTATGCTCGC CGCTGGGGAT
GAGAAGCGCT GGCGAGTGGC TACCATTGCA ACGATGATGA GCCACGCACC GTCCGTCGCA
CATCTTCCAC TCTTGAAAAG CATGCTTGAC GACAATTTAC GTCGTTATCG GGCTTTCCGC
GAAGAAGCGA CTGCCAGCGG CTGGAAGGAT CGCGACGCGG TCCACGAAGC ACAGCATCCG
CACATGCACG AGTACCAACG TGCGTTCTTG GCAATCAATG CGTCGGAGAC CGCTGCGCTG
ATGCGCCAAT ACCTGACGGA TGAGCATTTT GGCGAGCTGG CGGCGTGTGT GCTGGCTGCC
CAGTGGGTTG AGGCAAACGA ACCCAAGGAC GACAAAAAGT TCCTCATCGG CGTAGACTTC
TCGCGCGTGG AAGCGCGCCG GGACGCCCGC GCCGCCGATC CCGCCGCGAC ATCGATCGAG
GCGGAGGCGA TCTTCGGCGC AATCGAGACC TTGATTGTCG ATGGTTCGTC AGATGCGCAA
GTGAAGCTGG CGGTCGCGCT CGGCATTGTA GGAGCACGGC TCCCCCACGG CCAGCGTGAC
GCGACGATCC AGAAGCTCAT TTCTCTCGCG CCGAGGCAGG CGCGCGCAGG CTTGTTGTTG
TCGCTGGTCC TCTCTGGCGA GGACATCGAC ATCAAGCTCG TGGCCGACGG CATAGCTGAG
ACCTTTGAGG CGGCCGAGAA GGAGACTTGG ATTCTGACAC AAAGCGACGC GTATCAGCTA
CGCGATTGGT TGCGCCTTTT GCCGTTTGCC ACGCCTGTCA CCGATCTGCC CGCCATCGTG
CGCGGCATGC CGGATGCTCA GCGCCATCCA CGAATACTCG AAGAGATGGT CCGCGGACTC
GGCAGTTCGT CCTCGGACGA CGCAGAAGAT GTGATTTTCA CGCTCGCAGA AGATGATCCG
CGTCTCTACC AGAACCATGG GTGGCGCGCG ACCGCGTTGA GGTTCGGCAC CGTATCCGCC
GCGCGCCGCC TTGTTGACTT GACGATCAGC GGCGCGCTCG ACAACAAGTC ACACGACGGG
TGGCGTTGGC AACGTGAGTT GGGTGGTTTG ATTTCGGAGT TCTCCGAGGT CCGCGCCTAT
GTCCATGACC TCCTGAAGAA TGGGCCGACA ACGAAGCAGC TTGCCTTGCT AGCTAGCGCA
GTTGCCGAAG ACCCTGACAC GGACGGCGTA TTGATGCTGA TCGATTTTGA GATGAAAACC
GGACGTTCGT TCACGACGTG GCAGTCGATC CAAAGCGCTG TCACGGAGCA CGTCCCGGCA
GAGAACTGGG AAGGTGCGTA CAATGTCGTG CCCGTCCCGG CGGTCGAGCT GCGCCGGAAG
CTGCTGGCGA TGACGGGCAG CGGCGGCAAG GATGACCCCG CCGCCCGCTT TCTCAACCTC
ATAGACAAGC TCCGGGACGA GTACGGCGCT CCAGAATCGG AACCACGCCA TCCCGATCTT
GCGTCGGGTC GCCCTTGGCC GATCTTGACC CCAGATCCCG ATGCAGAGGA CGGAAACTGA
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| Protein sequence | MTKSKNRDDF SQATKNRLAK QARYHCSNPS CRKLTSAPTS DGSKEVNIGV AAHICAAAPG
VGARRYRADM TPEQRKSHEN GIWLCQDCAK AIDSDDPIFT EAFLHTWKQK HSEDMWRSII
DKLAFGPTMP PTFSEISARF QKAAAADLAV FRRTPKWPGT NVALTLTLKV KHVDEALSTR
ALANAVTTLD DLILVAAPGM GKTTTLFQVA DGLLEIGNGT PLIVPLGDWA TEGGALLASI
LKRPAFNGIS EQDFRAVATK PGVVLLLDGW NELDAAARER ARVQITALKA ELPELGLVIS
TRKQALDIPF GGTRVDLLPL DDEQQMEIAR GMRGEAGVQL VDQAWRTAGV RDLVTIPLYL
TALLSLPEGA PFPTTKEEVL RRFIAAHEQE ARRAAALHAV ALGFQQDYLD GLAVFATTTA
NTAITDSNAR KSVAETARVL VDDGQITIST QPDTLLDTLV SNHVLTRSGD MPGYSFQHQQ
FQEWYASHYV ERLMLQAVSD PAARENLKVD VLDQRPWEEA VLFAVERSAR GDAVHKAACS
AAIRAAFEVD PVLAGEMIFR ATDEVWAPIG TEMRNLAEQW HAPGKVDRAV RFMVASGRPE
FGDLLWPLIS HANTQVHLSA LRAAKRFRPS VLGNDAPVRI AALPPEIRKN VLHEIASHGG
IDGLDLATAI AKTDGDPDVK ATVVDALSFR RADRHVADLL ADAGDATYDI LAEKGHLDDI
AVDAVQRELQ RARERRKAFG TSHFQRLRTL VYAPEGDDRD AEVAEIVAEM EIDRKRDGEF
HLLYEVRKRY PHALAKGLLR RVREHRNLFY GADNILAAAG FSLEDDKLLG ISLEETNRHD
DRAEAAASVL GPIAVGRLID AYLAAGKVVR DASGKYDQSA GDRYHGLRDR IGHTPGASLV
AAVQARAADA DNEEIVQLAE LFSRETNGDE ERARPFSEEG LAAIGVLARK WAERMLAAGD
EKRWRVATIA TMMSHAPSVA HLPLLKSMLD DNLRRYRAFR EEATASGWKD RDAVHEAQHP
HMHEYQRAFL AINASETAAL MRQYLTDEHF GELAACVLAA QWVEANEPKD DKKFLIGVDF
SRVEARRDAR AADPAATSIE AEAIFGAIET LIVDGSSDAQ VKLAVALGIV GARLPHGQRD
ATIQKLISLA PRQARAGLLL SLVLSGEDID IKLVADGIAE TFEAAEKETW ILTQSDAYQL
RDWLRLLPFA TPVTDLPAIV RGMPDAQRHP RILEEMVRGL GSSSSDDAED VIFTLAEDDP
RLYQNHGWRA TALRFGTVSA ARRLVDLTIS GALDNKSHDG WRWQRELGGL ISEFSEVRAY
VHDLLKNGPT TKQLALLASA VAEDPDTDGV LMLIDFEMKT GRSFTTWQSI QSAVTEHVPA
ENWEGAYNVV PVPAVELRRK LLAMTGSGGK DDPAARFLNL IDKLRDEYGA PESEPRHPDL
ASGRPWPILT PDPDAEDGN
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