Gene Plav_1845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1845 
Symbol 
ID5453989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1996027 
End bp1996338 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content65% 
IMG OID640877424 
Producthypothetical protein 
Protein accessionYP_001413119 
Protein GI154252295 
COG category[S] Function unknown 
COG ID[COG5489] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.820476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTGA TAGGGATGTT CACGCCCACG AAGGAGGGAG GCTGGTCCGG CACGATCCGA 
ACCCTCACTA TCGATGCGAA GCTGCGCTTC GTACCGAACG ACAATCGCGA CAGCGAGCGG
GCGCCGGCCT TCAAGCTCTA TGTCGGCCGC TCAGAGATCG GCGCCGCCTG GCGGGAGCGG
AGCGGTGAGA AGGAGTATCT GAGTGTCCGG CTCGACGATC CGGTACTGGC GGCGCCCCTT
CACGCGGCGC TCTTCCCGAC GGAGGGGAAT CGGGAGGCTC ACCTCGTCTG GCGGCGGTGG
GAAACGACTT GA
 
Protein sequence
MSVIGMFTPT KEGGWSGTIR TLTIDAKLRF VPNDNRDSER APAFKLYVGR SEIGAAWRER 
SGEKEYLSVR LDDPVLAAPL HAALFPTEGN REAHLVWRRW ETT