| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1844 |
|---|
| Symbol | |
|---|
| ID | 5455882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 1995717 |
|---|
| End bp | 1996025 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640877423 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001413118 |
|---|
| Protein GI | 154252294 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5639] Uncharacterized conserved small protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.769483 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACC TGAAACTCGG CAAACTGCCC GACCGCACGC CGGTCAAGAT CACCTTCACC
GCGCCGCCCG ATCTCAACAA GGCGCTCCAC GCTTATGCCG CGCTCTATCG CGAGACCTAT
GGCGAGGCGG AGTCGGTATC GGAGCTCATC CCCTACATGC TGCAGAGTTT TCTGGAGGCC
GATCGCGGCT TTGCCAAGGC GCGGAAGGCG TTGCCGGAAG GAGAGGGCAA GGGATCTGGT
ATCGCTCAGC CGGGATCGGG AAGACGCGCA CCTCGAACGC TGTTGCTGCC AACGGACAAG
AAGGATTGA
|
|---|
| Protein sequence | MPDLKLGKLP DRTPVKITFT APPDLNKALH AYAALYRETY GEAESVSELI PYMLQSFLEA
DRGFAKARKA LPEGEGKGSG IAQPGSGRRA PRTLLLPTDK KD
|
|---|
| |