| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1843 |
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| Symbol | |
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| ID | 5454361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1994416 |
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| End bp | 1995711 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877422 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_001413117 |
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| Protein GI | 154252293 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.851946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGTC CCGCTTCGCC TCAGGGTCAA ACGCCCCCGC CCGGAAAAGT CGATCCCGAA
ACGCTGGCGC TGCGTGCAAA GCCGCGCCGC GTGACGCGCT TCCGGCGGAG CGTCGTCATC
GGCGCCGCGG CGGCAGGCTC AGCAACGATC TTCGCGCTCG CCTTTCTGGC GCTGGAGGGC
TCAAGCTTCC GTCTCATGGG ACCGGATGGC TCGGAACTCT ACCACCCGGA GCGGAAGGAG
AGGGCGGAGG GACTGGCGGC GCTGCCCGAG AGCTATGACG AGATCCCGAA GCCTATCCCC
GAACTCGGCG CACCGCTTCC CGGCGAGTTC GGCCGTCCCA TCGTCAGGCA GGAAGCCGAA
CTCGGCATCG ACAGCGGCGC CGGTCTCCGC CCAAACTTCG TGCCGAGCGC CGAAGAGAAC
GACGCCCGCG CCGAACGATT GCGGCTTGCG CAACAGGCGC GGCAGGCGGC GGAAGCCGGT
GTGTTCTTTC AATTGAAGGG AAGCGGAAGC GGGAAGGGCA GTGCTTCACA ATCGAGGATG
TCAGACGCGG GAGACAGCAC AGGCTTCCAA GCTGTTGCAG TCGACGAACG CCTCCATCTC
GATCCGAAGC GCGACCTGTC CTCCGTAGCT TCAGCGGAGG GGGACCAGAA CCATCAGCAG
CGCAAGCTCG ATTTCCTGAA CCGGGGACCG GACCAAGACA TCTATAACCG CCACGCACTG
CGGGAACCGG TCTCGGCGCA TCAGCTGATG GCCGGCAGCG TCATTGCTGC GAGCCTGATC
ACGGGGTTGA ATTCCGATCT GCCGGGCCTT GTCGTCGCCC AGATCACAGA AAATATTTTC
GACACGGTGA GCGGGAAAAC TTTGCTTATT CCGCAAGGAT CGAGGCTGAT CGGCAGTTAC
GACAGTGTCG TCGCCTTTGG TCAGTCGCGG GCGCTGCTCG TCTGGCACCG CATCATCATG
CCGGATGGGT CTTCGATCGT GATCGACAAT CTGCCGGCAA CGGATGCCGC CGGTTATGCC
GGCGTCGCCG ATAAGGTCGA CTACCACACA TGGGCGCTCG TCAAGGGCGT GGCGCTGGCG
ACACTTTTAA GTGTCGGCAC CGAGCTTAGT TTCGGCAGCG AGGAGAGCGA TCTCCTGCGC
GCGATCCGCC AGTCGACGCA GCAGAACGTT TCGCAGGCCG GTCAGCGTCT CACCGAGAAG
AACCTCAACA TCCAGCCGAC CATCACGGTG AGGCCCGGCT GGCCGATCCG CGTCATCGTG
CAGAAGGACC TGATCCTGCG TCCCTATCGA GGATGA
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| Protein sequence | MAGPASPQGQ TPPPGKVDPE TLALRAKPRR VTRFRRSVVI GAAAAGSATI FALAFLALEG
SSFRLMGPDG SELYHPERKE RAEGLAALPE SYDEIPKPIP ELGAPLPGEF GRPIVRQEAE
LGIDSGAGLR PNFVPSAEEN DARAERLRLA QQARQAAEAG VFFQLKGSGS GKGSASQSRM
SDAGDSTGFQ AVAVDERLHL DPKRDLSSVA SAEGDQNHQQ RKLDFLNRGP DQDIYNRHAL
REPVSAHQLM AGSVIAASLI TGLNSDLPGL VVAQITENIF DTVSGKTLLI PQGSRLIGSY
DSVVAFGQSR ALLVWHRIIM PDGSSIVIDN LPATDAAGYA GVADKVDYHT WALVKGVALA
TLLSVGTELS FGSEESDLLR AIRQSTQQNV SQAGQRLTEK NLNIQPTITV RPGWPIRVIV
QKDLILRPYR G
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