| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1839 |
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| Symbol | |
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| ID | 5456078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1990753 |
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| End bp | 1991478 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640877418 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_001413113 |
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| Protein GI | 154252289 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.835985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACATGCA CGACACTGCG GGCAGTGCTG CTCGTTCTCT GCCTCTCGGC TGGTCTCGTA
ATGGCATGCC TACGTCCCGC CGCCGCCATG ACCGTCTTCG ATCCCACGAA CTATGTGCAG
AACCTGCTGC AGGCGGTGCG CGCGCTGGAG CAGATCGACA ACCAGATCCG CTCCCTCCAG
AACGAGGCCG TGATGCTCGA GAATATGGCG CGCAATCTGG AGCGTCTCGA CCTCTCGACA
CTGGAGGGCA TGGTCTCGGG CCTCACAAGG ATCGGTCAGC TGATGGATCA GGCGCGCGGC
ATCGCCTTCA CCATCGAGGC AACGCAAGCC GCGCTGGAGC AGAGCTATCC CGAGCGTTAT
GGCGCGGAGG TCACTCACGA CGTGCTTCTC GCCGATGCCA AACAACGCTG GCGCGATGCC
ATGTCGGCCT ACGGCGACAC GATGCGCCTG CAGGCGGGCA TCGCGCGCAA TGTCGAGAGC
GACCAGGCGG CGCTCGTCTC GCTGGTCGCC GCCTCGCAGG GCGCGGTCGG TGTGCTTCAG
GCGCAGCAGG CGGCGAACCA GTTGCTCGCG CTCTCGACGA AACAGCAGCT TCAGATCCAG
AGCCTGATGG CGGCGCAATA CCGCGCCGAG GCGCTCGACG CAGCGCGCAA GGCCCAGGCC
GAGGAACAGG CCCGCGCAAG CTTCGACCGC TTCATGGGCG AGGGCAAAGC CTACAGGGCA
CAGTGA
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| Protein sequence | MTCTTLRAVL LVLCLSAGLV MACLRPAAAM TVFDPTNYVQ NLLQAVRALE QIDNQIRSLQ
NEAVMLENMA RNLERLDLST LEGMVSGLTR IGQLMDQARG IAFTIEATQA ALEQSYPERY
GAEVTHDVLL ADAKQRWRDA MSAYGDTMRL QAGIARNVES DQAALVSLVA ASQGAVGVLQ
AQQAANQLLA LSTKQQLQIQ SLMAAQYRAE ALDAARKAQA EEQARASFDR FMGEGKAYRA
Q
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