| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1833 |
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| Symbol | |
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| ID | 5453561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1984249 |
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| End bp | 1986312 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640877412 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | YP_001413107 |
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| Protein GI | 154252283 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGA CAAAACTTCT GATCGGTCAG GCGCTGATCG TCTTCGCGAT CGTCATTCTC
GGCGTCTGGA CCGCGACGCA ATGGGCAGCC TTCGCGCTCG GTTTCCAGGC ACGTCTCGGC
GCGCCCTGGT TCATCCTCCT CTCATGGCCC GTCTATTATC CCTGGCGGCT CTTCGAGTGG
TGGTATGCCT ATGAGGCCTA TGCGCCGGGC GTCTTTACGC GGGCAGGCGC GATCGCCGCT
TCGAGTGGCG TCGCCGGATG CGCGGTCGCC ATTGCCGGCT CTCTCTGGCG CGCCCGGCAG
GGCAAGCTCG TCACCACTTA CGGTTCGTCG CGCTGGGCGA AGCGCGGCGA GATCGAGCGG
GCAGGACTCT TCCGCGCCGC CGGCGTGTTT CTGGGGCGGC TTGGCGAGCA GTATCTCCGT
CATGACGGAC CGGAGCATGT CATGGCCTTC GCGCCGACGC GCTCCGGCAA GGGCGTCGGT
CTCGTCGTGC CGACGCTTCT TTCCTGGACA GGCTCGGCCG TCATTCACGA CATCAAGGGC
GAGAACTGGC AGCTGACCGC CGGTTGGCGG AGCCGCTTTT CCCATTGCCT CCTCTTCAAC
CCGACCGATC CACGCTCTGC CCGCTACAAC CCGCTGCTCG AAGTGCGCAA AGGCCCGGAC
GAGGTTCGCG ACGTCCAGAA CATCGCCGAT ATCCTGGTCG ATCCGGAAGG CGCGCTCGAA
CGCCGCAATC ACTGGGAGAA GACGAGCCAC GCGCTGCTGG TCGGTGCGAT CCTGCATGTC
CTTTATGCGG AAGAAGAGAA GACGCTTGCC CGCGTCGCGA CGCTCCTGTC GGACCCGCGA
CGCTCCTTCG AGCACACGCT GCGTGCCATG ATGGCGACCA ATCATCTGGG AACACCGGAG
CATCCGGAGG TTCACCCCGT CGTGGCGTCC GCCGCCCGCG AGGTCTTGAA CAAGTCCGAC
AATGAGCGCT CCGGCGTGCT CTCGACCGCC ATGTCGTTTC TGGGGCTTTA CCGCGACCCG
ATCGTCGCGG CGACGATCTC GGCCTGCGAC TGGCGGATCG CCGATCTCGT TGATGCAGCG
CGGCCGGTCT CGCTCTATCT CGTCATTCCG CCGGCCGACA TTTCGCGCAC GAAGCCGCTG
GCCCGGCTCG TGCTCAACCA GATCGGGCGG CGCCTCACCG AGAAGCTCGA AGGCGATCCG
GCAAAGCGGC GGCGCTACGG GCTGCTCATG ATGCTGGACG AGTTCCCGGC GCTCGGGCGG
CTCGACTTCT TCGAAACGGC GCTCGCCTTC ATGGCGGGCT ACGGGATCAG GGCCTATCTG
ATCGCCCAGT CGCTCAATCA GATCTCCAAG GCCTATGGCG AGAACAATGC GATCCTCGAC
AATTGTCATG TCCGGATCGC CTTCTCCTCC AATGACGAGC GGACCGCGAA GCGGATATCG
GACGCACTCG GCACCGCGAC TGAACTGCGC GCCCAGCGCA ACTATGCCGG GCACCGCCTG
GCGCCCTGGC TCTCCCATGT CATGGTCTCG CGGCAGGAAA CGGCGCGGCC GCTCCTGACG
CCCGGCGAGG TGATGCAATT GCCTTCGGCA GACGAGCTTG TGCTGGTCTC GGGTCTTGCG
CCCATTCGAG CGAAGAAGCT CCGTTATTAC GAGGACAAGA ACTTCACCGA GCGGGTGAAG
CCGGCGCCGG TCCTTGCCGA GAATGGCTAT CGCGACAGGC CCGCTCCGCG TCCCGACGAC
TGGAGCGGCC AGGTGCGCGG GCTCGATCAC CGGCTCGCCA CCGCAAGCGT CCCCGATCCC
GATGCCGGAC TGGCGGAAGA GGAAGGCGGT CTCCAGCAGC AGCGCCATCC GGGCCGGCCC
GCGAAGGAGG TCGCGAAACG GCGCGAGCAC CGCGAAGCGA CACTCGGCCT TTTCGACGAT
GACGGCGATG CGGGCACCGA TCCTAGGGCA ATGGATGGAG GAAAACGCGG CGGGCGCAGC
TCGATCAGGC GCGCCTATGC GGCCAATGCG GGGAGCGACG GCGACCGTCA CCGCGCCTCG
CAAGAACTGC TCCCTGGATT TTGA
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| Protein sequence | MTPTKLLIGQ ALIVFAIVIL GVWTATQWAA FALGFQARLG APWFILLSWP VYYPWRLFEW
WYAYEAYAPG VFTRAGAIAA SSGVAGCAVA IAGSLWRARQ GKLVTTYGSS RWAKRGEIER
AGLFRAAGVF LGRLGEQYLR HDGPEHVMAF APTRSGKGVG LVVPTLLSWT GSAVIHDIKG
ENWQLTAGWR SRFSHCLLFN PTDPRSARYN PLLEVRKGPD EVRDVQNIAD ILVDPEGALE
RRNHWEKTSH ALLVGAILHV LYAEEEKTLA RVATLLSDPR RSFEHTLRAM MATNHLGTPE
HPEVHPVVAS AAREVLNKSD NERSGVLSTA MSFLGLYRDP IVAATISACD WRIADLVDAA
RPVSLYLVIP PADISRTKPL ARLVLNQIGR RLTEKLEGDP AKRRRYGLLM MLDEFPALGR
LDFFETALAF MAGYGIRAYL IAQSLNQISK AYGENNAILD NCHVRIAFSS NDERTAKRIS
DALGTATELR AQRNYAGHRL APWLSHVMVS RQETARPLLT PGEVMQLPSA DELVLVSGLA
PIRAKKLRYY EDKNFTERVK PAPVLAENGY RDRPAPRPDD WSGQVRGLDH RLATASVPDP
DAGLAEEEGG LQQQRHPGRP AKEVAKRREH REATLGLFDD DGDAGTDPRA MDGGKRGGRS
SIRRAYAANA GSDGDRHRAS QELLPGF
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