Gene Plav_1829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1829 
Symbol 
ID5455445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1980403 
End bp1981299 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content54% 
IMG OID640877408 
Producthypothetical protein 
Protein accessionYP_001413103 
Protein GI154252279 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.660383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACGG TCGACGAAGC CTTCAGAAAG TTCAAAAGCC GTCTTGAGCT GAACGACAAA 
GAGCAGAAAA ACGCATCCGC ACGCCAAACG GAGGTGCGAG ACTACATCGA TACTAAGTTC
AAGATCGATC GGAGCTTTCT CACAGGCTCA TATGCACGTT GGACCAAGAC GAAGCCTCTC
AAGGACGTCG ACATCTTCTT CGTCCTGAAG TCCTCCGAGG ATCACTATCG GTCCAAGGCG
CCATCAACGG TTTTGACCGA TTTCCATGAT GCATTGGTCG AAAAATACGG CGACAACGCC
AGGAAGCAAA ATCGATCAAT CAACATCGAC TTTGGGGTCA CGGCCGACAC CGACGACAAC
ACTGACTACC GTGTTATCAG CGTAGATGTC GTTCCGGCGT TTGATGTAGG TGATGATTTC
GAGATTCCCG ATGATGAACT CAAAAAATGG ATAAAGACAA ATCCACAAAC GCACGCCGCA
AAGGCGACCG CAGCGCACCA AGCTTATTCC AGTGAGTGGA AGGGGCTGGT GCGGATGGTG
AAGTACTGGA ACAACCATCC GAAGCACGGT GAGAAGCCGG TAAAGCCCTC ATTCCTTCTC
GAGGTCATGG CGCTTCAGTG CCTGCATGGC GGGTGGGGTG GAAGCTTCGA CCGTGAGGTG
CAGGGTTTTT TTGCGACGCT TGCAGATCGA ATGCTTGATG AGTGGCCTGA TCCGGCAGGT
CTTGGTCCGG CGATTAGCAA CGGGATGGAT ACCGCGCGCA GAGCGCGGGC ATGCGATCTT
CTCCGCGCGG CAGAGCGCCA AGCCACGCTT GCAATTGCTC ATACACGTTG CGGTCGAAAT
GGCGAAGCGC TCCGGGCGTG GCGAGATCTT TTTGGGCCGA AGTTCCCGCT ATCTTGA
 
Protein sequence
MLTVDEAFRK FKSRLELNDK EQKNASARQT EVRDYIDTKF KIDRSFLTGS YARWTKTKPL 
KDVDIFFVLK SSEDHYRSKA PSTVLTDFHD ALVEKYGDNA RKQNRSINID FGVTADTDDN
TDYRVISVDV VPAFDVGDDF EIPDDELKKW IKTNPQTHAA KATAAHQAYS SEWKGLVRMV
KYWNNHPKHG EKPVKPSFLL EVMALQCLHG GWGGSFDREV QGFFATLADR MLDEWPDPAG
LGPAISNGMD TARRARACDL LRAAERQATL AIAHTRCGRN GEALRAWRDL FGPKFPLS