Gene Plav_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1827 
Symbol 
ID5454785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1979430 
End bp1979906 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content58% 
IMG OID640877406 
Producthypothetical protein 
Protein accessionYP_001413101 
Protein GI154252277 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG TTGCAAGCCG CACTTTCAGG AGCACTCCCG GGCGTGATGC CGCACAAACC 
TGGATAGCGA TCGTCGACCT TCTGACGCAG GGAAAATCCG GCGATGCTCG TACTGAGCTT
CTTGCTGTCG TTGGCACCGC CGCCAGCGTG ATCGCGGATC AAGCGCCGAA GGATGCCGCG
ATTACCGTGA CCTGCGATGG CCCCCGCACC CGCATCTATT GCCTTTATGA CGAGGATGCG
ATCGAGGGCT CTGATGCCAA TGAGGATCCA CTCGGCTTTG AACCTTTGAA AGGGGACTGG
AGGATTTCGC TTCCCTGCCT GGCTGATGAT CTCGTCTGGG TTCAGAGCGC CCTGAAGCAG
CACAGCACTC GCATTACGGC TCGCGATCTC GACGCAACTG TCCCCGGTGC GAACGAGTCG
GCAACAACGA AATCCCAGAC ACTTGTTTTT GACTCGAAAG GATTCCTCGG CTCATGA
 
Protein sequence
MSTVASRTFR STPGRDAAQT WIAIVDLLTQ GKSGDARTEL LAVVGTAASV IADQAPKDAA 
ITVTCDGPRT RIYCLYDEDA IEGSDANEDP LGFEPLKGDW RISLPCLADD LVWVQSALKQ
HSTRITARDL DATVPGANES ATTKSQTLVF DSKGFLGS