Gene Plav_1826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1826 
Symbol 
ID5455537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1978510 
End bp1979433 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content58% 
IMG OID640877405 
ProductATPase central domain-containing protein 
Protein accessionYP_001413100 
Protein GI154252276 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0464] ATPases of the AAA+ class 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAGT TGGCTGCGGT GCAAGATGAG GATTTCAATC GACCGAAGGG TATCCAGCGG 
ATGCGGCGGC TTCCGGATCC CAAGCTTGGC GCTCTTTGGG AATCGATAAT CATTGAAGAA
CGCCTGAAAG CGCAGCTCCT TTCGCAGGCG ATGCTGAATT TCACGATGCG CGGCAAGGTC
GATCGAAGTG TGATCCCCTT GCATGGCGTG ATCCTTCTAG TCGGGCCGCC AGGGACGGGG
AAAACCTCTC TCGCTCGCGG ATTGGCGCAT CGTACTGCCG AGTCGTTCAA GGGAAGCGGG
TTCCACCTGC TCGAGGTCGA GCCACATGCA TTGACCAGCT CAGCGATGGG TAAAACTCAA
CGGGCCGTAT CGGAGTTGTT TTCGCAGTCA ATTGCAGAGT CTGCCGTCAG AGGACCGACT
ATCGTTCTTC TCGACGAAGT CGAAACACTG GCAGCTGACC GCTCAAAGAT GAGTCTCGAA
GCCAACCCGA TCGACATTCA TCGGGCAACC GATGCGGTCC TCGTCCAGCT TGACGCCCTT
GCCGAGAAGC ATCCGAACCT GCTGTTTCTC GCTACTAGCA ATTTCCCTCA AGCTGTCGAC
GCAGCGTTCA CGTCGCGCTG CGACCTTGTC GTCCATGTGC CCTTGCCGGA CCGCGAAGCG
TGCGCACGCA TTCTGAGGGA TTGTCTAACG GGCCTCGGTA AGGTCTACCC AGCTATCGCA
AGATTGCCGA GTGTTGCGGG CTTTGATCGC TGCGCAACCG AATGCGTTGG TCTCGACGGG
CGAGCCATCC GCAAGATGGT GGCCAATGCA CTGGCGAGCA ATCAGAAGAC GGCCATGGAT
CCGGAACGTG TGACGATCGA CGACCTGCTT GCAGCCGCTC GTGCCGCCAA GGCGGGACGT
ATCATGGGAG GCGGAGCGTC ATGA
 
Protein sequence
MQKLAAVQDE DFNRPKGIQR MRRLPDPKLG ALWESIIIEE RLKAQLLSQA MLNFTMRGKV 
DRSVIPLHGV ILLVGPPGTG KTSLARGLAH RTAESFKGSG FHLLEVEPHA LTSSAMGKTQ
RAVSELFSQS IAESAVRGPT IVLLDEVETL AADRSKMSLE ANPIDIHRAT DAVLVQLDAL
AEKHPNLLFL ATSNFPQAVD AAFTSRCDLV VHVPLPDREA CARILRDCLT GLGKVYPAIA
RLPSVAGFDR CATECVGLDG RAIRKMVANA LASNQKTAMD PERVTIDDLL AAARAAKAGR
IMGGGAS