Gene Plav_1824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1824 
Symbol 
ID5455687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1977686 
End bp1978039 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content59% 
IMG OID640877403 
ProductXRE family transcriptional regulator 
Protein accessionYP_001413098 
Protein GI154252274 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACG GAGCTATTTA CAAGGCGTTC GGGCGGGCCG TCGCGACGCG GCGGAAAGAG 
CTCGGATTTA CTCAAGCCGA TCTGGCTGGC CGGGTGGGTA TGTCGCGCGC GTCTGTCGCC
AATATCGAGA GTGGCCGGCA GAACGTGCTG CTGCATCACG TCTACAATCT CGCCTCGGCG
CTTCAATTCT CAAAAGTCTC AGATCTGCTG CCGACCCAAC TGAAACCTGC GACGCAGGAG
GACTTAGACA TGATCCTATC GGACGAAACT CTAACCGCGC GTGGCAAAGC CCAGGTCACC
GACCTAATCG CGAGCGCGTT GGCCCAACGC AGTTCTACAA AGGCGGCGTC GTGA
 
Protein sequence
MSDGAIYKAF GRAVATRRKE LGFTQADLAG RVGMSRASVA NIESGRQNVL LHHVYNLASA 
LQFSKVSDLL PTQLKPATQE DLDMILSDET LTARGKAQVT DLIASALAQR SSTKAAS