| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1796 |
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| Symbol | |
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| ID | 5456837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1950732 |
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| End bp | 1952414 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640877376 |
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| Product | D-aminoacylase domain-containing protein |
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| Protein accession | YP_001413071 |
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| Protein GI | 154252247 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.897442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTACG ATCTGAAGAT CGTGGGTGGA TTCATTGTCG ACGGCACCGG CTCTCCGGGC
TATGCCGGAG ACATCGGTAT TCGCGATGGC AAAGTTGTGG CTATGGGGCA GGCCCCCGCC
GGGGCGAGGA CGACTATCGA CGCCCGGGGG CAGGTCGTTG CCCCCGGCGT CGTCGATATA
CATACGCATT ACGATGCCCA GCTTCTGTGG GACAGGAATC TGTCGATCTC GCCGTGGCAC
GGCGTGACGA CGGTCGTGGT GGGCAATTGC GGGTTCGGCA TCGCACCGAC GCGCAAGGAG
CACCGCGGCC TTATTCTGCG GACGCTCGAA AATGTCGAGG GCATGAGCGT CAGGGCGCTG
GAGGCCGGTC TCGGCGACGA ATGGGGGTTC GAGACGTTTC CCGAATATCT CGACGTCGTG
GAAAAGAAGG GTACGTTGAT CAACGTGGCC GTTCTTCTGG GGCATACGCC GCTTCGCCTC
TATGCCCTCG GGCCTGAATC CACCGAACGG GCGGCGCGGC CGGAGGAGGT CAGGCATATG
AAAAGCCTGA TGCGCGAGGG CCTCGAAGCG GGCGCACTCG GTTATGCGAC ATCGAAATCG
CCGACGCATG TGGGCTACGA GGGCAGACCG GTTCCAAGCC GGCTGGCGGC GTTCAGCGAG
ATACGGGAGA TCGCGTCGGC GCTGGGCGAG GCGGGCGAAG GCGTGATACA GGCGACTGTC
GGCAAGGAAC TGTCATTTGA TGAATTCGCG GAATTGAACC GCGTTTCCGG TCGCCATGTC
AGTTGGACGG CGTTGCTGGG CGGTGGCGGG GTGCTGAATG TCGGCTCCGC AGCCGAGCAG
TTGGCGCGCT CAAACGAACT TCAGTCGGCT GGTTACGCGG TGTTTCCGCA GGTCACCTGC
AGGCCACTCA ATTTTGAATT TCGATTCGAT CAGCCGTTTC TGTTCCAGAG CATGCCGGTC
TTCGCGCCGG TGAACAAAGC CGACCGCGCG GAAAAACTGA GGCTTTACGC CGACAACTCT
TTCCGGGCGG GATTCCGGGA CGCGATGCGT GGTCCGATTC TCAGTGCATG GGACAAGGCG
GTCATCGCTT ATTGTCCGGA TCGGCCGGAG TTCGGAGAAC GGCTGGTGTG CGACGTAGCA
GCGGAACTCG GATGCAACTC GATCGATCTT GCGTTGGATC TCTCGATTCA AAGCGATCTG
CAGACGCGGT TCCGCCTGCC TGTCGCAAAC GCCGACGAAG ACGAAGTGGC AACGTTGCTG
CGCGATTCCT GCACGGTGCT CGGCCTCTCG GACGCAGGCG CGCATGCGAG CCAACTCTGC
GATGCATGTT TTTCTACGCA TCTTCTCGGA AGATGGGTCC GTGAAAAGCG CGTTTTGACG
CTGGAGGAGG CGGTCCGGAT GCTGACATCG CGGCCCGCCG AGGTGTTCGG CATCAAGGAT
CGCGGTCGCC TCGCTGTGGG AATGCCCGCC GATGTCCTGA TCTTCGACGC CGAAACGGTT
GGCGCAAGTT CCCTTCGCAG GGTCTATGAC CTGCCTGCTG GCGAAGACCG GCTGATTTCC
GATGCCTCGG GCATTTCGGC CGTCGTCGTC AACGGGACAT TGATCCGGCG CAATGGCGTC
GATGTGTTGG GCGCCGAAGG TCGTTTGCCG GGCCGTCTGT TGCGCCATGG CGCAGCAGCC
TGA
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| Protein sequence | MDYDLKIVGG FIVDGTGSPG YAGDIGIRDG KVVAMGQAPA GARTTIDARG QVVAPGVVDI
HTHYDAQLLW DRNLSISPWH GVTTVVVGNC GFGIAPTRKE HRGLILRTLE NVEGMSVRAL
EAGLGDEWGF ETFPEYLDVV EKKGTLINVA VLLGHTPLRL YALGPESTER AARPEEVRHM
KSLMREGLEA GALGYATSKS PTHVGYEGRP VPSRLAAFSE IREIASALGE AGEGVIQATV
GKELSFDEFA ELNRVSGRHV SWTALLGGGG VLNVGSAAEQ LARSNELQSA GYAVFPQVTC
RPLNFEFRFD QPFLFQSMPV FAPVNKADRA EKLRLYADNS FRAGFRDAMR GPILSAWDKA
VIAYCPDRPE FGERLVCDVA AELGCNSIDL ALDLSIQSDL QTRFRLPVAN ADEDEVATLL
RDSCTVLGLS DAGAHASQLC DACFSTHLLG RWVREKRVLT LEEAVRMLTS RPAEVFGIKD
RGRLAVGMPA DVLIFDAETV GASSLRRVYD LPAGEDRLIS DASGISAVVV NGTLIRRNGV
DVLGAEGRLP GRLLRHGAAA
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