Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1795 |
Symbol | |
ID | 5455169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1949570 |
End bp | 1950673 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640877375 |
Product | amidohydrolase 2 |
Protein accession | YP_001413070 |
Protein GI | 154252246 |
COG category | [R] General function prediction only |
COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.733672 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAAGA AGCCGATATC CGCGGATTCG CACATCACCG AACCTCCGCA TTGCTATGTT GATTACATTG ATCCCAAATT CCGTGATCGC GCGCCGCGCA TCCAGCGGAT CGACAAGATT GGCGATGCTT TCATCGTCGA TGGTATGGGG TCTCCAGTTC CGATGGGGCT GGTGGCCGCC GCCGGCAAGG ATCCGGCGGA GATCACGACA GACGGCGTCG CCTTCGAAGA CCTGTGGAAG AGTGGCTGGG ACGCCAAGTT CCGCGTTGCG GACCAGGAGA AGGATGGCAT TGCGGCCGAG TTCATCTATC CGACGGTCGG AATGGTGATC TGCAACCATC CCGACTTCGA CTACAAGAAG GCCTGCTTCG ACGCTTATAA TCGCTGGTTG CAGGAATACT GCGGGGAGGC GCCTGACCGT CTTTACGGTC TTGCGCAGGT TTCCATGCGA TCACCGGAAG ATGGCGTTGC GGAAATCAGG CATGCGAAGG AGATGGGCTT CAAGGGTGTG ATGATGCCCG GAAACCCCGC CGTCGAGGAT TATGATTCAA CTGTATACGA CAAGGTCTGG GCGACCGCTG TCGAGTGCGA CATGCCGCTC TCGTTCCACA TCCTGACCGG CAAATCGGAC AGTCTTTCGG GGCAGGTCCG GGGTCCGCGT ATCAACGGCT TCCTCTCGAT CATTCGTGGC TGCCAGGACG TGATGGGCAC TTTCATATTC GGCGGTGTCT TCGATCGCTT CCCCGACCTC AAGGTTGTCT GCGTCGAGGC CGATGCGGGC TGGGTTCCGC ACTACATGTA TCGCATGGAC CATGCCTACA AGCGTCATCG CTACTGGATG AAGGCGCCGC CGCTCAAGCG GATGCCGAGC GACTATTTCA ACGACAACAT CTATGTGACG TTCCAGGACG ACTGGGTTGC CTTCAGGATG AAGGATATGT GCAATGTTCG CCGCCTGATG TGGGCGAACG ATTTCCCGCA TTCGGATTCG ACCTGGCCCT GGTCGCAGGC AATGCTGGAA GAGCACACGA AAAATCTGAG CGAGCAGGAA CGCAACTGGA TATGCCACGA CAACGTCGCG GAACTCTACA AGCTCGCCGT TTGA
|
Protein sequence | MIKKPISADS HITEPPHCYV DYIDPKFRDR APRIQRIDKI GDAFIVDGMG SPVPMGLVAA AGKDPAEITT DGVAFEDLWK SGWDAKFRVA DQEKDGIAAE FIYPTVGMVI CNHPDFDYKK ACFDAYNRWL QEYCGEAPDR LYGLAQVSMR SPEDGVAEIR HAKEMGFKGV MMPGNPAVED YDSTVYDKVW ATAVECDMPL SFHILTGKSD SLSGQVRGPR INGFLSIIRG CQDVMGTFIF GGVFDRFPDL KVVCVEADAG WVPHYMYRMD HAYKRHRYWM KAPPLKRMPS DYFNDNIYVT FQDDWVAFRM KDMCNVRRLM WANDFPHSDS TWPWSQAMLE EHTKNLSEQE RNWICHDNVA ELYKLAV
|
| |