| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1792 |
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| Symbol | |
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| ID | 5455821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1945392 |
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| End bp | 1947083 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640877372 |
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| Product | 3-oxosteroid 1-dehydrogenase |
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| Protein accession | YP_001413067 |
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| Protein GI | 154252243 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.157211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.304525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACA ACGGAGCGGG AGCCGGTATT CGCTGGGACA AGGAAGTAGA CTGGCTGGTC
GTGGGCGGCG GCGGCGCCGG AATGGTGTCG GCTCTGACGG CCAATCATCT GGGCCTCGAT
ACGCTGGTGA TCGAAAAAGC GCCTTATATG GGCGGCAGCA CGGCTCGATC GGGTGGCGTG
GTCTGGATTC CCAACAACTA CCTGGTGCGC GAAGGCGGGT TACCGGACTC GGAGGAACGG
GCCAGGAGCT ACATGGCCAG CACGGTCGGC AACCGCGTGC CCTCGGAAGT TCAGGAATCG
TTTGTGAAGT ACGGTCCGCA GATGATCGAG TTCCTGCGCG ATCACACGGA AACGCGCTTC
GTTTGGAGCA AGGGATATTC GGACTATTAC CCCGAAGCGA CTGGCGGCTT CCCTGAAGGC
CGCGCCCTGG AAGCCGTTCC CTTCAACGGG ACTTTGCTTG GCGCCAATCA GAAATATTTC
CGCCCGCCGG TTCTGTCGGG CACTCATTAC GCCGGCCTCC TGCTGTTCGA GTTGTTTTCG
GTCGCCCGGA TGCGCCGTCA TTGGGATGGA AAACGCAAGT TCATGAAGGC GGCTTTCAAC
ACGATCACAA ACAGGCTGCT TGGAAGAAAA GTGATGACGG CGGGGCAGGG CACCGCCGGT
CGGCTCTTTT ACTCCATATT GCGTGCCAAC ATTCCGTTCG AAGTGAATAC GGCCCTGACG
TCGCTGGTGA CGGAGAACGG TCGCGTCGTG GGCGCCGAGG TGTCGAAGGG CGGCAGGACG
CTTCGGTACA AGGCGCGGCG CGGCGTGGCG CTGACCGCCG GCGGTTTCGC CCACAATCAG
GAAATGCGCG ATCGTTATCT GCCGCATCCC ACAAGCTCGA AATGGTCGCT TGCCGCCGAA
AGCGATATGG GCGATGCCAT TCGTGCCGGT GAGAGCATTG GTGCCCGGCT CGATCTGATG
GACGACGCTT GGTGGGGTCC GGTCAGTCAC GTAAACGCCA ACGAGAACCC GCATTTTTGC
GTTCTCGAGC GCTCGCTGCC GGGATCGATG ATCGTGAATT CCTCGGGCGA TCGCTTTGTA
AACGAGGCGG CGCCCTATTG CGACGTGGTC ACCAGAATTT ACGAAATGCA TAACGGGACA
GATACGTCCT GCGTGCCGGT ATGGCTTATC CTGGATAAGG CGTACAAGGA TTACTATATG
ATTGCCTCGA ACATGCCGCG CCAGCCCATA CCGAAGCGGT GGAACGAAAG CGGCGACGTG
ATCTCGGCGC CAGACCTTGC GGAACTTGCG GAGAAGATAG GCGTTCCGGC GGATCGACTC
GCGAAGTCGA TGGAGCGATT CAACAAGCTT GCCGAAACCG GTGTCGATGA GGACTATCAT
AGGGGCGACA GTGCGCATGA CCGCATGTAC GGCGATCCCT ATTTCAAAAA TCCGAACCTG
GCGCCGTTGA CGAAAGCTCC CTTCTTCGCC ATCCGGCTCT ATCCCGGCGA CATCGGCACG
CGCGGCGGGC TTGTTATCAA CAGGTTCGGA CAGGTGGTCT CGCAGTCGGG GGAGGTTATC
GAGGGCCTTT GGGCGGCGGG CAACAGCACG GCGTCGGTCA TGGGAAATTC CTACCCCGGA
CCCGGCGCGA CTATCGGACC GGCCATGACA TTCGGTTACA TTTCTGCCAT GAAAGGAGCG
GGACTCATCT GA
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| Protein sequence | MADNGAGAGI RWDKEVDWLV VGGGGAGMVS ALTANHLGLD TLVIEKAPYM GGSTARSGGV
VWIPNNYLVR EGGLPDSEER ARSYMASTVG NRVPSEVQES FVKYGPQMIE FLRDHTETRF
VWSKGYSDYY PEATGGFPEG RALEAVPFNG TLLGANQKYF RPPVLSGTHY AGLLLFELFS
VARMRRHWDG KRKFMKAAFN TITNRLLGRK VMTAGQGTAG RLFYSILRAN IPFEVNTALT
SLVTENGRVV GAEVSKGGRT LRYKARRGVA LTAGGFAHNQ EMRDRYLPHP TSSKWSLAAE
SDMGDAIRAG ESIGARLDLM DDAWWGPVSH VNANENPHFC VLERSLPGSM IVNSSGDRFV
NEAAPYCDVV TRIYEMHNGT DTSCVPVWLI LDKAYKDYYM IASNMPRQPI PKRWNESGDV
ISAPDLAELA EKIGVPADRL AKSMERFNKL AETGVDEDYH RGDSAHDRMY GDPYFKNPNL
APLTKAPFFA IRLYPGDIGT RGGLVINRFG QVVSQSGEVI EGLWAAGNST ASVMGNSYPG
PGATIGPAMT FGYISAMKGA GLI
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