| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1790 |
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| Symbol | |
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| ID | 5457002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1943936 |
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| End bp | 1944727 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640877370 |
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| Product | 4-oxalocrotonate decarboxylase |
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| Protein accession | YP_001413065 |
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| Protein GI | 154252241 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0308919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.205885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGGATA GTGCGACAAG GTCAAAAATC GTTGACGAGC TTTTCGACGT CTACGAGACA
CGCAGGCCGC TCCGGCGGCT GACCGGAACC TATCCTGGCT TGACCGTCGA GGATTCCTAT
CTGGTTCAGG AAGAGTTCGT CCGCCGCAAG GTTGACGCGG GCGCGAAGGT GAAGGGCTAC
AAGGTAGGGC TCACGTCGAA ACCGATGCAG GAAATGGCCG GATCTTCGGA GCCGGATTTC
AGCGCCATAA CCGACGACAT GTTCCTGCCT GAAGCGACGC CGATCGATGC TTCCCGGTTT
TTCCGCCCGA TGATCGAAAT CGAAATCGCA TTCGTCATGA AGCACGCGCT CAAGGGGCCG
GGCGTGCTGC CCGTCGACGT CATCAGGGCG ACCGATTTTG TTGTCCCTGC GATTGAGATT
GTCGATTTCC GCGTAATGCC GGAGCCCGGT TTCGGCATGA TCGACACCGT GGCCGATCTG
GCTGCCTGCG GCGCTGTCGT GCTGGGCGCC AATCCGAGAC GGCTCGACGC GATCGACGTG
CGGCGCGTAC ATGGCGAATT GAGGTTGAAC GGCAAATTGG AAGTCGAGGG CGATGCCTCG
GCGGTTCTGG GCAATCCCGT CACGTCCGTC GCCTGGCTTG CGAACAAGCT CGGCCAATTC
GGCGTTGTTT TCGAGCCGGG GCAGGTCGTG CTTACCGGGT CCTTTGTGCG GGCAATCCCC
GTTAAGGCCG GCGACGACGT TTTGTGCCGC TTCGACCAGG GATTGGGCGA TCTGTCGATG
AGTTTTACCT GA
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| Protein sequence | MLDSATRSKI VDELFDVYET RRPLRRLTGT YPGLTVEDSY LVQEEFVRRK VDAGAKVKGY
KVGLTSKPMQ EMAGSSEPDF SAITDDMFLP EATPIDASRF FRPMIEIEIA FVMKHALKGP
GVLPVDVIRA TDFVVPAIEI VDFRVMPEPG FGMIDTVADL AACGAVVLGA NPRRLDAIDV
RRVHGELRLN GKLEVEGDAS AVLGNPVTSV AWLANKLGQF GVVFEPGQVV LTGSFVRAIP
VKAGDDVLCR FDQGLGDLSM SFT
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