| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1767 |
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| Symbol | |
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| ID | 5455564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1920220 |
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| End bp | 1921080 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640877348 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001413043 |
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| Protein GI | 154252219 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.189281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGTTC AGAAGACTCG ATTCGGGTTT TCCGATGAGG AACTGAAGGC TCTACCCACG
GTTTATCGAG CTGATCTTTT TTCGGGGAAA ACGGTCGTCG TTTCCGGCGG CGGCAGCGGT
TTCGGCAAGG CGATTGCCTG TCTTTTGGCA CGACTGGGCG CAAACGTCGC CATATGCGGG
CGCAACGAAG AAAAACTTGC CGCGACGGTT TCACTTCTGG AAAGCATGGG CGCGCAGGTC
TTCAGCCGGT CCCTGACCAT ACGCGATCCG GATCAGGTTG ACGGTTTTAT TGAAGCGGTC
TGGGATAAAT TCGGCGCGCT CGACCTTCTC GTGAACAATG CCGGCGGCCA GTTTCCGCAA
ATGGCCCTCG ACTTCAAGGT CAAGGGATGG AACGCCGTCA TCGACACCAA TCTCAACGGC
ACCTGGTACA TGATGCAAAG CGCCGCGCGG CAGTGGGTCG AAAGAAAGAC CCCCGGCTCG
ATCGTGAACA TCATCGCGGA CATATGGCGC GGAATGCCGG GCATCGCGCA CACATGCGCG
GCGCGCGCCG GTGTTGCCTA TCTGTCCAAA TCGGTGGCCG TCGAATGGGC ACCCCATCGC
ATCCGCGTCA ACTGCGTCGC ACCGGGCGTC TGCGAAACGA GCGGTTTTGC GCAATATCCA
CCCGAAGGTC TCAAGACCTA TCCTGGCGCA AATCCGATGC TGCATGTCGG CGACGCCCAC
GACATCGCCG AGGCTGTTGC CTATCTCGCC TCGCCGGGCG CCAAGTTCAT TACCGGCGAG
GTATTGACGG TCGATGGCGG CGAGCAGCTC TGGGGCGACC CGTGGCCCCC CGGACGACCG
GATTATTTCC AGCCAAAGTA A
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| Protein sequence | MEVQKTRFGF SDEELKALPT VYRADLFSGK TVVVSGGGSG FGKAIACLLA RLGANVAICG
RNEEKLAATV SLLESMGAQV FSRSLTIRDP DQVDGFIEAV WDKFGALDLL VNNAGGQFPQ
MALDFKVKGW NAVIDTNLNG TWYMMQSAAR QWVERKTPGS IVNIIADIWR GMPGIAHTCA
ARAGVAYLSK SVAVEWAPHR IRVNCVAPGV CETSGFAQYP PEGLKTYPGA NPMLHVGDAH
DIAEAVAYLA SPGAKFITGE VLTVDGGEQL WGDPWPPGRP DYFQPK
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