| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1763 |
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| Symbol | |
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| ID | 5454936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1915501 |
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| End bp | 1916490 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640877344 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_001413039 |
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| Protein GI | 154252215 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.0633742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAGCA AGCAAGCGCG ACCCATTGTC GGCACGATGA TCGGAGATCC GGCAGGGGTC
GGTCCCGAGG TGATTGCCCG CGCCCTCGCG ACTGGCCATG TGCATGAGCT GTCCATTCCC
GTCCTGATCG GCAGCGCGGC GGCAATGGAG CGCGCCGTGG AAATCACCGG CGTGTCGTGC
AGCGTGCGGG TGACCCGATC GATCGACGAT CTGAGCGACG ACCCTGCTAT CGTCGACATC
ATCGATTCAG GCGCCTTGAA AGCGTCCGAA CTGCCGCTCG CGGAGGATAC GGTGCGCGGC
GGGGAGGCAT CGGCGCTGTG GCTCGACGAA ATGAGTGCCC TTGCATCCGG CGGCGCCATC
GCGGCTGGCG TCATGGGACC AATCAGCTCC GGCTCCCTCA AACTTGCCCG CAAGGTGCCG
GGCATCGTCA GTCCGACACC CGGCGAAAGC TATCTTGTTC TGCTGACTGG TCCGCTCCGC
GTCGCGCATC TGACCGACCA TATTCCGCTC CGGCGCGTTT GCGAAATCAT CAGCCCCGAT
CTCGTGGCGC TTGCCTTGCG GCAGATAGAC GGCGCTATGC GGAACTGGGG GATCGCCCGC
CCGCGGATTG TCGTCGCGGG ACTCAACCCT CACGCGATGG GAGATGAAGA CCGCGAAGCC
ATCGCGCCCG GCGTCGCGCG GGCGAGGGCG GAAGGCATAG ATGCCGAAGG GCCCGTAAGT
CCCGACTCCG TGTTCCGGCA ATGCGTTGAA GGCCGATACG ACATCGTCCT CGCGATGTAT
CACGATCAGG GACACATCGC GGTCAAGACA TGGGGCTTTT CCGGCAATTG CGCCATCATC
CTCGGGCCGT CCTACCTGCA TGTGACGGTC GCGCATGGAA CGGCCTATGA CATTGCGGGC
AAGGGCACCG CCGATCCGGC GATGATGCTG AGCGCCATGC GCACGGCGGC CTCTCTTGCC
GCGGGCCGAG GATTTCCCGA GGAACGCTGA
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| Protein sequence | MNSKQARPIV GTMIGDPAGV GPEVIARALA TGHVHELSIP VLIGSAAAME RAVEITGVSC
SVRVTRSIDD LSDDPAIVDI IDSGALKASE LPLAEDTVRG GEASALWLDE MSALASGGAI
AAGVMGPISS GSLKLARKVP GIVSPTPGES YLVLLTGPLR VAHLTDHIPL RRVCEIISPD
LVALALRQID GAMRNWGIAR PRIVVAGLNP HAMGDEDREA IAPGVARARA EGIDAEGPVS
PDSVFRQCVE GRYDIVLAMY HDQGHIAVKT WGFSGNCAII LGPSYLHVTV AHGTAYDIAG
KGTADPAMML SAMRTAASLA AGRGFPEER
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